Crassostrea virginica (eastern oyster): 111124637
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Entry
111124637 CDS
T09197
Name
(RefSeq) nuclear receptor subfamily 1 group I member 2-like isoform X1
KO
K05547
thyroid hormone receptor alpha
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111124637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111124637
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cvn03310
]
111124637
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
111124637
Nuclear receptors [BR:
cvn03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
111124637
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
111124637
NCBI-ProteinID:
XP_022323395
EnsemblRapid:
LOC111124637
UniProt:
A0A8B8D6Z5
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Position
3:67867553..67903496
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AA seq
556 aa
AA seq
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MEISSSSASPEDFQVEEKDFPTKSLVLGDVKTSHKVLNPQMPNMSGLSGPMDYLEQDCDQ
ESPDSSAGASMTFQKKDKTCLVCGDKALGYNFNAVSCESCKAFFRRNAHKVIRGRCEGRC
DITVESRSFCKKCRLAKCFTVGMRKDMILNDEQKQVRKQKIIINKLRKHGQLPPEDTYAA
SHQDVNDSLQDRIRSQNLHNLRMSFPNLSDKELDVLMKMKSEPYTESKDPSANIKYPSWS
ESQGIVAEILSNLPEIDQCILNELRIAHEQSSFLANTSTSLKAPPTNATEFVNLAEGFVR
RIIKVAKNIEFFKMICKEDQIALLKGSVVEIMMLRSAINYNVQTESWSFNTMKCLSKPPG
PSTSSESGSEGSTTGGSTPTESQDGPFSKGTGMQMGVSQSGEEMKKLREMMGSRVKEGGV
EMGTDVGTVSASILKAGGSETYNMFLTYSKFIKSLMRTIHGDLLALKLLIMLSLFSADRQ
GVVEHDKIQQIQECYAGILQKYVQRRFPEDKITFAKIVMKLTDLRNINEVHTKMLLKMKV
DSIEPLLIEIFDLPNE
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggaaatatcatcaagctcagcatcaccagaggattttcaggtagaagaaaaagatttc
cccacaaaatcattggtcctgggggatgtcaagacaagtcacaaggtgctgaatcctcag
atgccgaatatgtctgggctctctgggccgatggactacttagaacaggactgtgatcaa
gagagcccagattcttcagcgggggcatccatgacctttcagaagaaggataagacctgc
ctggtgtgtggggacaaggcgctgggctacaacttcaatgcagtgtcctgcgagtcctgt
aaagctttcttcagaaggaatgcacacaaggtaattcgagggcgctgtgagggacgatgt
gatataactgtggagtccaggtccttctgcaagaaatgccgcttggcaaagtgtttcaca
gtcggcatgagaaaggacatgatattaaatgacgagcagaaacaagtcagaaagcagaaa
atcatcataaacaaattacgaaaacatggccagcttccgcccgaggacacatatgctgcc
tctcatcaggacgtcaacgattctctacaggaccgaatccgctcacagaacctacataat
ctacgaatgtccttcccaaacttgtcagataaagaactggatgtcctcatgaaaatgaaa
tcagagccctacactgaatctaaggatccatctgccaacatcaagtatccaagctggagt
gaatcacagggcattgtggcagaaatcttgtctaacttacccgagattgatcagtgtata
ctcaatgaactgaggattgcccatgaacagagttctttcttggctaacacatcgacttct
ctgaaagctccgcccacaaatgcaacagaatttgtgaatttagcagagggatttgtgagg
agaattatcaaggtggcaaaaaacattgaattctttaaaatgatatgtaaagaagaccag
atagccctgctgaagggttctgtagtggagatcatgatgttaaggtctgctatcaactac
aatgttcaaactgaatcgtggagctttaacaccatgaagtgtttgtccaaacctccagga
ccatcaacaagttctgagtcaggatcagaggggtcaaccactggtggatccacccccaca
gagtcacaagatggaccattttctaaggggacagggatgcaaatgggagtatctcagagt
ggggaggaaatgaagaagctgcgagaaatgatgggttctcgtgtcaaagaaggaggcgtt
gagatgggaacagacgtagggacggtcagtgccagtattctgaaagctggaggatcagaa
acatataacatgttcttgacttattccaagtttatcaaatctctcatgcggacgatacat
ggggatctgttggccctgaagctgctcatcatgctatcacttttctctgcagacaggcaa
ggtgttgtggaacatgacaaaattcaacagatacaagagtgctatgctggaattctacaa
aaatatgtacaaagaagatttcctgaggataaaatcacgtttgccaaaattgttatgaag
ttgactgatcttcgaaatattaatgaagttcacaccaaaatgttgctcaaaatgaaagtg
gacagtatagaacctttgttgatagaaatattcgatttgccaaatgaatga
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