Crassostrea virginica (eastern oyster): 111126417
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Entry
111126417 CDS
T09197
Name
(RefSeq) probable ATP-dependent RNA helicase DDX31
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cvn01009
]
111126417
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvn03009
]
111126417
Enzymes [BR:
cvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111126417
Protein phosphatases and associated proteins [BR:
cvn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111126417
Ribosome biogenesis [BR:
cvn03009
]
Eukaryotic type
Pre-60S particles
Helicases
111126417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
ERCC3_RAD25_C
EST1
Motif
Other DBs
NCBI-GeneID:
111126417
NCBI-ProteinID:
XP_022326759
EnsemblRapid:
LOC111126417
UniProt:
A0A8B8DGS9
LinkDB
All DBs
Position
3:complement(54025665..54037390)
Genome browser
AA seq
710 aa
AA seq
DB search
MSNEDSLQLNFFVGDEKHTKRKHSYSNKRGTRIKQRKLEKRASKNNKHTTKDQETQHKHR
TETSTELLNKAGETERHRNSDLNPPSLKRKQSEDSTAIPVKKERLENKVFISSLFRFNPE
IPSVKRSAVPSKTEEVFSSKFFKDLDLHPFMITNLEERLQITQMTNVQQRAIPPILNGQD
VMVKSQTGSGKTLTFAVPVVQHLQSITPKITRMDGVHALVIVPTRELVLQCFETFRKLVN
PFQWVVPGCLMGGEKRKSEKARLRKGMNILVCTPGRLLDHIKNTNSLSLSKVKWLVLDEA
DRMLDLGYEKDVGEIVNALDSDTHRQTILLSATLTEGVERLAGISLTDPLRIDISNMEEE
NPSVEVVSSTVQEKNENFVVPGKLKQSFVITPCKLRLVTLTAFLLLKMKMVKNPGKMVVF
LSTQDSVEFHYKLMNHFFGGEEADDNPNFAEEGDLDFFKLHGEMPQKERTKVFQEFSSAK
TGVLFCTDVASRGLDLPDVRWIVQYTTPGAVQDYIHRVGRTARVGKQGHALLFIMPAEVE
YLKSLTSHGICIEEIKMADILKTLIIAVQDMVTDLDRKKTPPKTYEESATYMQLCFENYV
VEDNKMSDIARKAFQSFIRAYATYPSNLKTIFHVKNLHLGHLAKSFGLREAPGSINDKRG
KPQNHGRKNKLKQERFGSKRSDPRISQFSSLAVSEFSSGLSHGRLPKKKH
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatgaagactcgctacaacttaatttcttcgttggagatgaaaaacacacaaaa
cggaaacattcttacagtaacaaaagaggaacgagaatcaaacaaagaaaactggaaaaa
agagcatcaaagaataataaacatacaactaaagaccaagaaactcaacacaaacacagg
acagaaacaagcactgaactactgaacaaagctggagagactgagcgtcatagaaatagt
gatttaaatccaccctccttaaaaagaaaacagtctgaagactcaacagcaatcccggtc
aaaaaagagagacttgaaaataaagtgtttatttcttcactgtttagattcaaccctgaa
attccatctgttaaaaggtcagctgttccaagtaaaacagaagaagttttttcttcaaaa
tttttcaaggatctagatctgcacccttttatgattacaaatcttgaggaaagattacag
attacgcaaatgacaaacgttcaacaaagagcaattcctccgattttaaatggccaagat
gtcatggtcaagtcacaaacaggatctggtaagacccttacatttgctgtaccagtagtt
caacacttacaaagcataacacctaagattacaagaatggatggggttcatgctcttgtt
attgttccaacaagagagctagtcttacagtgctttgaaacattcaggaaattagtaaat
cctttccagtgggtggtgccaggatgtttgatgggcggtgaaaaaaggaaatcagagaaa
gcgaggctcagaaagggtatgaacattttagtgtgtacacctggacgtctgttagaccac
atcaagaatacgaacagtcttagtctgagcaaagtcaaatggctggtgttggatgaagca
gacagaatgttggatcttggatatgagaaggatgttggagaaatcgtcaatgccttggat
tcagacactcataggcaaaccatactgctctcggccacattgactgaaggtgtggagaga
ttggcaggtatctctctgacagatccacttaggatagatatatctaacatggaagaagaa
aatccatcagtggaggtggtgtctagcactgtacaggagaagaatgagaactttgtagtt
ccaggaaaactcaaacagagctttgtcatcacaccctgcaagctgagactggtgaccctc
actgccttcctcctcctgaaaatgaaaatggtcaaaaatccagggaaaatggtggtgttt
ctatcaacacaggactcggtagaatttcactacaagctgatgaatcatttctttggcgga
gaggaggcagatgataatcccaactttgctgaggaaggagaccttgatttcttcaaatta
catggagaaatgccacagaaggaaagaacaaaagttttccaagagttcagttctgccaag
actggtgttcttttctgtacagatgttgcctcacgtgggctagatttacctgatgtgcgt
tggattgttcagtataccaccccaggggcagtgcaagactacattcatcgcgtgggaaga
acagccagagtgggcaaacagggtcatgctcttctcttcatcatgccagcggaggtggag
tatttgaagtccctaaccagtcatggaatatgtatagaagaaataaaaatggctgatatc
ttgaagacattgattattgctgttcaagatatggtgacagatttggacagaaagaaaaca
ccaccaaagacttatgaagaaagtgccacatacatgcaactctgctttgaaaattatgtt
gtagaagacaacaaaatgtcagacatagccagaaaagccttccagtctttcataagggcc
tatgcaacatacccctctaatctgaagactatattccatgtaaaaaaccttcatcttgga
caccttgctaagagctttggtttgcgggaggcacctggctccatcaatgataagcgtgga
aaacctcaaaaccatggcaggaaaaataagttaaagcaagaaagatttggttccaaaaga
agtgatccaagaatttcccaattttcttcactggctgtgtcagaattctctagtggttta
tcccatgggagactacccaagaaaaaacactaa
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