Crassostrea virginica (eastern oyster): 111134660
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Entry
111134660 CDS
T09197
Name
(RefSeq) lysine-specific demethylase 2A-like
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
111134660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111134660
04121 Ubiquitin system [BR:
cvn04121
]
111134660
03036 Chromosome and associated proteins [BR:
cvn03036
]
111134660
Enzymes [BR:
cvn01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
111134660
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
111134660
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
111134660
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
111134660
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
111134660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
JmjC
JHD
Cupin_8
F-box-like
LRR_4
F-box
LRR_8
LRR_6
Rubredoxin
Motif
Other DBs
NCBI-GeneID:
111134660
NCBI-ProteinID:
XP_022339620
EnsemblRapid:
LOC111134660
UniProt:
A0A8B8EHR0
LinkDB
All DBs
Position
5:complement(46106683..46127500)
Genome browser
AA seq
1301 aa
AA seq
DB search
MTDSPDRGRKLRVKERKTYTDVDLDDDDIDGKRSYTLDEKLKSNKYNKKYVTELKGSEFS
LKYVQENGLQNPIVFREKTGLGLRVPSENFKVSDVKQCVGSRRMLDVMDVNTQKGMEMSM
REWVQYYENPERQRLLNVISLEFSHTKLENYVESPTFVRQIDWVDTVWPRHLKECQTEST
NIIEKMKYPKVQKYCLMSVQGCYTDFHIDFGGTSVWYHILHGEKVFWLIPPTEKNVEIYT
NWVLSGKQGDIFLADHVEGCQKIELLQGFTFIIPSGWIHAVYTPKDSLVFGGNFLHSYNI
RNQLRVSEVEDKTRVPQKFRYPFYTEIAWYVLARYITCLTGKQCLELPPEDKENEDRREL
SPFLHDDCSQDTDNSVLTQRSATPKLSKSVTIELTRIDQSPSIHRSISDEEVVAPQRIRS
PHKSSSDSCSSADTEIYDKSEDIFGPLSSSESQEKKMDTCQAVCKKGKSSESTYKMAPSP
SLRVNKKEIKLCYLTEWERNGLSQLIEWIEEHPTAKKGYPKDILDPETLLNDAKQLVKDH
AADDQTLACNGEAILVWPPSKKPSKPKVYKMGQGHLKLTKSQQAKSNSSSCIRRRRTRCK
KCEPCTRTDCGECNFCKDMKKYGGPGRMKQSCKSRQCLAPVIPNAAVCMICGKDERVKSA
ENPEEMTTTLMECCICWEINHPECVRKKHENLESEGVINEDLPNSWECPKCCQEGKQGLL
KARFSRVKKEESLYSPRPSSPASSYDSTTEFKSESEAEGKRVVMKQEREYSDFEVNDDSL
TETESSSLDDKIGMITIIQSQEKKTPPSPSPKHKASFKQILKKKFTPKSLEVKRKPGRPI
GSSSPLKKKGSRSVSPEKSSKVKEAVITRSGRKVKRSPQLYDDDMELDFPKKRPKREGFV
SRPDGQGEMEDKVMKGQGLLSSSAANDNQPTDCYYSSEEGGQFEFVQTKVRKVSEDKQTV
KDEQPPQKSKKLKQNYVGARKGGKKTEKVSNGGAKFTQLKPRDASDIGQGKVMEVVQRKF
VVRPPAPSPPPDCVELRGGGHHPLEKIHWSKVFSFLPYSDLARCLSVCKAFYSWGMNCEL
WPLIDLSRKRICQSHLIGIVKRQPNSLKLDNVIMTQQQLTWLLARVPLLRNLSLSSCSWT
TVSALCFSCCPLLTSLNLSWMLGLNHPRFKDLITPPTDLRPGMNDVSRLHNLKTLGVAGT
EVEDECLQLIPHHLTGLRELDISYCPRISNEGIKKLLEGNNGVLTKSLQVLDISGSRLVT
NIALDSLVKCENLSVVKIHKCSNITAISVQKFPNKMVKFQK
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgactgattcaccagacagaggacgcaaattgagggttaaggagaggaagacgtacacc
gatgtagacctggatgatgatgacattgatggcaagagaagctacactctggacgaaaaa
ctcaaatccaataagtacaacaaaaagtatgtcactgagctgaagggaagcgaatttagc
cttaagtatgttcaggaaaatggacttcagaatcctattgtatttcgggaaaagacagga
cttggccttagagttccaagtgaaaacttcaaagtatcggatgtcaaacagtgtgtaggg
agcaggaggatgctggacgtgatggatgtcaacactcagaaagggatggagatgtctatg
cgggagtgggtgcagtattacgaaaatccagaacgccagaggctgctcaatgtcatcagt
ctggagtttagccacaccaagcttgagaattatgtggagtctcctacttttgtgagacag
attgattgggtggatacagtatggcccaggcatttaaaggaatgtcagaccgagtcaacc
aacatcatagagaaaatgaaataccccaaagtccaaaagtactgtttgatgagtgtgcag
ggttgttacacagatttccacatcgactttggtggtacctccgtgtggtaccacattctg
catggggagaaggtattctggttgattcccccgacagagaagaatgtggagatctacact
aactgggtgctctcaggaaaacagggagatatattcctagctgatcatgtggaaggctgc
cagaaaatcgaacttctccaagggtttaccttcattattccatcaggctggattcatgca
gtgtatacaccgaaagattccttagtgtttggtggtaattttttgcatagttacaacatc
cgaaatcaattgcgtgtgtctgaagtggaggacaaaactcgtgtgccacagaagttccgt
taccctttttatacagaaatagcttggtatgtactggcaaggtatatcacctgcttgact
ggcaaacagtgcttagaactgcccccagaggacaaagagaatgaggacagaagagagttg
tctcccttccttcatgatgactgttcacaagacacagacaacagtgttctcacccaaagg
tccgccacccctaaactctctaaaagtgtcaccattgaactgacccgaatagaccagtcc
ccttcaatacatcgatcaatcagtgatgaagaggtggtcgcacctcagcgaatcagatcc
ccgcacaagtcctcttctgacagctgtagttctgcagacacagaaatatatgacaagtct
gaggatattttcggacctctgtccagcagtgaatcacaggagaaaaaaatggacacctgt
caagcagtgtgcaagaagggcaaatctagtgaatctacatacaagatggctcccagtcca
tctcttagggtgaacaagaaggaaattaaattgtgttacttgacagagtgggaaaggaac
ggattatctcagttaattgagtggatagaggaacatcctacggctaaaaaggggtatcca
aaagatatactggatccagaaacactgttaaatgatgcaaagcaactggtgaaagaccat
gcagccgatgatcagaccctggcttgtaatggagaggctattcttgtttggccaccatca
aaaaagccttccaaacctaaagtttacaaaatgggtcaaggacacttgaagcttacaaag
tctcagcaggccaagagtaattctagctcctgtatccgccggcggaggacacgctgtaaa
aagtgtgaaccctgcacaaggactgactgtggggagtgtaacttctgtaaagacatgaag
aaatatgggggaccaggtcgaatgaagcagtcctgcaaaagcagacagtgtttagcacct
gtaatacccaatgcagcagtctgtatgatctgtggtaaagatgaacgggtgaagtcagca
gaaaatccggaagaaatgaccaccaccctgatggaatgctgtatttgttgggagattaat
caccctgaatgtgtgcgaaaaaaacatgagaatttggaaagcgagggggtcatcaatgag
gatctgccaaacagctgggagtgtcccaagtgttgtcaagagggtaaacaaggtttgctg
aaggcccgcttttctcgagtcaagaaagaggagagtctatacagtccccgacccagcagc
ccggcatcatcttatgactcaacaacagaattcaaatcggaatcggaggctgagggcaag
cgtgtggtcatgaagcaagaaagggaatattctgattttgaagtaaatgacgattcccta
actgaaacagagagcagctcattggatgacaaaataggaatgataacaataatacagtcc
caggaaaagaagacgccgccatctccatcacccaaacacaaggcctccttcaagcagatt
ctgaagaaaaaattcactcccaaatctcttgaggtcaagaggaaaccaggcagaccaatt
ggctcatctagtcctctgaaaaagaagggatcacgttctgtttctcccgaaaagagttca
aaggtcaaagaggcagttatcactaggtctggtcgcaaagtcaaaagatctccgcaattg
tatgacgatgacatggaattggatttcccaaagaaacgacccaagcgtgagggctttgta
tccagaccagatggccaaggtgaaatggaggacaaagtgatgaaaggtcaaggtcttttg
tcatcatccgcagctaatgataaccagcctactgattgctactattcctcagaggaaggg
ggtcagtttgaatttgttcagacaaaggtcagaaaggttagtgaagacaaacagactgtg
aaagacgaacagcctccccaaaagtccaaaaaactaaaacagaattatgtaggggcaagg
aaaggggggaagaaaactgaaaaagtgagtaatgggggtgcaaaattcactcaactgaaa
ccgagggatgcgagtgacattggccagggtaaagtgatggaggtggtgcaaaggaagttt
gtggtgcgaccaccagccccgtcaccacctcctgattgtgtggaactccgaggaggaggt
catcatccacttgaaaaaatccactggtcaaaagtgttctccttcttaccttactcggac
ttagccaggtgtttgtctgtctgtaaggccttctacagctgggggatgaattgtgagctc
tggccccttatcgatctgagtcggaaaaggatttgtcagtcacacttgattggcatagtg
aaaagacaaccaaacagcctgaagttagacaatgtgataatgacacagcagcagctgacg
tggctccttgctcgcgttccactgctgagaaatttgtccctctcctcctgctcatggacc
acggtcagtgccctctgtttctcttgttgtcccctgctgacctcactcaacctcagctgg
atgctggggctgaaccacccccgctttaaagacctcatcactcctcctactgacctcaga
ccagggatgaacgatgtgagtcgcctccataatttaaagaccttgggagttgcgggaacg
gaggtggaggacgaatgcctgcagcttattccacaccaccttacagggctgagggaattg
gacataagttactgtcccagaattagcaatgaaggaattaaaaagcttctggagggcaat
aatggcgtgttgaccaagtctttgcaggtgctggacatttcgggctctcggctggtgaca
aacattgccctggacagcctggttaagtgtgaaaatctctctgtggtcaaaatacacaag
tgttccaacatcacggcaatatccgtgcaaaaatttccgaacaaaatggtgaagtttcag
aaatga
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integrated database retrieval system
