Crassostrea virginica (eastern oyster): 111136448
Help
Entry
111136448 CDS
T09197
Name
(RefSeq) trafficking protein particle complex subunit 8-like isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111136448
Membrane trafficking [BR:
cvn04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
111136448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
SNAP
Motif
Other DBs
NCBI-GeneID:
111136448
NCBI-ProteinID:
XP_022343012
EnsemblRapid:
LOC111136448
UniProt:
A0A8B8ESW6
LinkDB
All DBs
Position
5:complement(21462609..21477519)
Genome browser
AA seq
1488 aa
AA seq
DB search
MAVCKQTANEFIQNTFSPSVAVLCSPDAEVLCQKNNLTFVELVQPFCRLTTEVHIRDPNN
IPHTIKNLKITMRDMNMQLPQAVTARKMMNDVVANTQPQLTEGGRGNVVTFGSYDLQLSA
STPWYETYRDTFLKVLPPSDHEFLSHCLSCLFVVSSGHSDPITAFNTLSSNQHQQQTQFP
TKMPRWFCPGILKYYVLLHDVVEGEDAKYDIAQYQNLALRAEAVYQSMKSSFGAQNCHLL
HINSRSLHTAESMHTDLPDPWSQFLNKNNSEANSRKRNKARYYIAWEGAEYDTGGSSIID
DAFPTKLSEGATENHTLSGPILSNSSLVDMSPDSGEGTASSGSLTSETFDHPLSEPSVDM
ENHVESPLSPVRSYNSELNHSASKGKLGDRKQGGHGICLTTSDQDRIKIFMHELCVRALI
PWAERQMKILNEQHASRKGISKSLFSATKRWFGGNKPTGQVAANQNTTVVYSSDAPELQM
RRLGDIAFLFQMYDFAYNTYHAAKRDFNNDHAWLHYAGALEMACISMFMSGNPREQKYPF
HYMESAITTYLQSCKNPLYATRATLVSTEALKSRKMFNEAALQFIKLTSEDSDLRSALLL
EQAAHCYINMEIPKVRKYAFHMILAGHRYSKSGQRKHALRSYSQALQVYKGKSWSLAEDH
INFTLGRQSLNLKQLDNATAAFKHLLTENSKQIPSQQNAFLREYLFVYKQLLSQEMSTYG
SVHSSTLPELPIPMLDNNATKVLVGHKPQHNQDKLGHVGYDYSESNHPRWETLEESLVSS
ANNGIIPITHRPSIQCFTNKTDNRFNPVAYVGEPVTVELFLVNPLKVVLVLNEVTLLWSF
LPSIPGQEKTQLITNEVFSSVKNTLANEIIHTQVIDEIVLPGSERSPVQFTLTPHQTGEL
RIVGICYNLSSSLTEDRNIKPSPANTVFVRGKQRLDVQGPRLNNTKEEKSNKMYGPDRRL
DLVIQPEMPQLQVSFCNFPKSLLCGEVQAVMFQFTNIGTSPLHKLKLATCTPEFITLGNH
GELPKFPCVYQTSSDVSGQETKCDCNKRDKLSNVMDIPLPNRTLQPKSTVSVPAWVRGND
IGGVHDVHFMFYYEPVTNSPKARHRLQRHTAVINTLESLSVRSVARRANNTHQNSSTQGS
CVISCEMENISQVQANRAYVKEIQVNQVSCASDLWSIKYLSSQDNSEITVGCRETMHLCL
KATKSAGNLDSVLGKESVIFSDVSFSDQQISSALTPCADFFLRSKSHGTTEDSIPNKVDR
KSGDKNFSDLNCAIQLGMTLIILWKACVIAEDGEVQIKVGQHHVIVKKIDTIFTSYPFFI
IPTEKPPVRFTKTWEEQENPRPESEVTTQLVDINFSHQAQVPHNFQNNKIAIVPVTLLLR
NFTKKSLDILVDTSKSPDRLNNRTEEKFVNPEVHHLTSFSWVSQTLTKVSLDANQQRAVH
MTACFSKPGIYNVNRLSVFVTYTKDASEMVLQKHPSPSVVTVQDVSTE
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtgtaagcaaacggccaatgagttcatacagaacacgttcagtccctctgtg
gctgtgctctgtagcccggatgcagaggtgttgtgtcaaaagaacaacttgacttttgta
gagttggtgcaaccgttttgtcgccttacaacggaagtccacattagagacccaaataac
attccgcacaccataaaaaatctcaagatcacaatgcgagacatgaatatgcaacttccg
caggctgtgacagctagaaaaatgatgaatgatgtggtggcaaatactcaacctcagctg
actgaaggtggaaggggcaatgtagttacctttgggagttatgatttacagttatcagca
tcaacgccatggtatgaaacctatagagacactttcctaaaagtgctaccaccaagtgat
catgaatttttaagccattgcttgagctgcctttttgttgtatcctctgggcattcagac
ccaatcacagccttcaacactctgtcgtccaatcagcaccaacaacagacccagtttcca
accaagatgccacgatggttctgtccagggatcctcaagtactacgtgctgctccatgat
gtagtggagggggaagatgctaagtacgatattgcacagtatcagaaccttgccctcagg
gcagaggctgtgtatcagagtatgaagtcttcctttggtgcccagaactgccacctgctg
cacatcaattcccgtagtctacacacagcagaaagcatgcacacagatcttcccgatccc
tggagtcagttcctgaataagaataattcagaggctaatagtagaaagcgaaacaaagct
aggtattacattgcgtgggaaggagcagaatatgacacaggaggcagcagtattatagac
gatgctttccccaccaagctgtctgagggggccacagagaatcataccctgtcgggaccc
atcctgtccaacagcagcctggtcgatatgtctcctgactcaggggagggaactgcctcc
tctggatctctaaccagtgagacctttgaccaccccttatcagaaccctctgtagacatg
gagaatcatgtagagagtcccctctccccagtcaggagttacaactcagaactcaatcac
tcggcgtccaagggaaagctcggggacaggaaacaggggggtcacggaatatgtttaacc
actagtgaccaggaccgaatcaaaatcttcatgcacgagttgtgtgtgcgagctctgatt
ccatgggcagagaggcaaatgaagatacttaatgaacagcatgcctccaggaaaggaata
agcaagtctctatttagtgctaccaagcgatggtttggtggaaacaaacctactgggcaa
gtggcagccaaccaaaacactacagttgtatattcaagtgatgccccagagcttcagatg
agaagacttggagacattgctttcttgttccaaatgtatgattttgcatacaatacttat
catgctgccaagcgtgactttaataatgaccatgcatggctgcattatgctggagctctg
gaaatggcttgtatatctatgtttatgagtggaaatccaagagagcagaaataccccttc
cactatatggagtcagccattaccacatatctacagtcctgcaaaaatccattatatgca
acaagagctactcttgtaagcacagaggcactcaaaagtaggaaaatgtttaatgaagca
gccctacaattcatcaagctcaccagtgaggactcagatttacgaagtgctctattattg
gaacaagctgcccattgttacatcaacatggagatacctaaggtcaggaagtatgcattt
cacatgatattggcaggtcatcgatacagcaagtcggggcagaggaagcatgccctgcgg
tcgtactcccaggccctgcaggtgtacaagggcaagagctggtcattggcagaggaccac
ataaactttaccttaggaagacagtctcttaatttgaaacaattggataatgcaaccgca
gctttcaagcaccttctaacagagaatagtaaacagattcctagtcaacagaatgctttc
cttagagaatacctctttgtttacaagcaacttctaagtcaagaaatgtccacttatggc
agtgttcattctagcacattgccagaacttccaatacccatgcttgataacaatgctaca
aaagtcctggttggccacaaaccccaacacaaccaagataaattgggacatgtaggctat
gactacagtgagagcaaccacccaaggtgggaaactctggaggagtccttagtgtcttct
gctaacaatggcatcatccctatcactcatcggccatccatccagtgctttaccaataaa
acggacaacagattcaacccagtggcttatgttggagaaccagtcacagtagagctcttc
ctggtgaaccccctgaaggttgtgcttgtgttgaatgaggtcacacttctctggagtttc
ctcccctccattcccgggcaggaaaagacacaactcatcacaaacgaagtcttttcttct
gtgaagaatacccttgccaatgaaataatccacacacaagtaattgatgagattgtgcta
ccagggtctgagagatctcctgtacagtttacattgacccctcaccagactggggagcta
aggattgtgggtatctgctacaatctgtccagttccctgactgaggacaggaacattaaa
ccctcccccgccaatacagtgtttgtcaggggcaagcagagactggatgttcagggacca
cgactgaacaacaccaaggaggagaaatcaaacaaaatgtatggccctgaccgtaggtta
gacttggttatacagcccgagatgccacaactccaggtttccttttgcaattttccaaaa
agtttactttgtggtgaagtgcaagcagtgatgtttcagttcacaaacattggaactagt
cctttacacaaactaaagctagccacatgcactcccgagttcataaccttggggaatcat
ggagaattacccaagtttccatgtgtttatcagacttctagtgatgtgtcaggccaagag
acaaagtgtgattgcaataagagagacaaactttctaatgtaatggatattccgttgcct
aaccggacacttcagccgaagagtactgtgtcggtaccagcatgggtccgtgggaacgac
atagggggtgtccatgatgtacattttatgttttactatgaacctgtgaccaattccccc
aaagccagacaccgattacagcgtcacacagctgtcatcaacactctggaatccctcagt
gtcagatccgtggctcgacgagcaaacaacacacaccagaactcctccacccagggaagc
tgtgtcatctcctgtgaaatggagaatatcagtcaggtgcaggccaacagagcttatgta
aaagagattcaggtgaatcaagtttcctgtgccagtgacctctggtccattaagtacctc
agttctcaggacaattcagagataacagttggatgcagggagaccatgcatttatgttta
aaagcaacaaagagtgcaggtaacttggattccgttcttggtaaagagtctgtgatattt
agtgatgtctctttctctgatcagcaaataagtagtgctttgacaccttgtgctgatttc
tttctgagatcaaagtcacatggtactaccgaagattctataccaaataaggttgatagg
aaatcgggagacaaaaacttcagtgatttaaactgcgccattcagcttggaatgactttg
attattctgtggaaggcatgtgtcatagccgaagatggggaggttcaaatcaaagtcggc
caacaccatgtcatcgtcaagaagattgacaccatttttacttcttaccccttttttatt
attccaactgaaaaaccaccagtgcgctttacaaaaacctgggaagaacaggaaaacccc
aggcccgagtccgaagtcacaacgcaactggtggacatcaacttcagccatcaagctcaa
gtacctcataactttcagaacaacaagatagccattgttcctgtaactctgttgctgagg
aatttcaccaagaaatccttagacatattagtcgatactagcaagtcacctgatagattg
aacaacaggacagaagagaaatttgttaatcctgaagttcatcatttgacaagttttagt
tgggtctctcagactttgaccaaagtaagcttagacgccaatcagcaacgagctgttcat
atgacagcgtgcttcagtaagcccggtatttacaatgtgaatcggctttctgtgtttgtg
acttataccaaggatgcttcagaaatggttctccagaaacatccctcacccagtgttgtt
actgttcaagatgtttccacagagtaa
DBGET
integrated database retrieval system
