Chlorella variabilis: CHLNCDRAFT_137938
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Entry
CHLNCDRAFT_137938 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
cvr
Chlorella variabilis
Pathway
cvr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CHLNCDRAFT_137938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvr03041
]
CHLNCDRAFT_137938
Enzymes [BR:
cvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CHLNCDRAFT_137938
Spliceosome [BR:
cvr03041
]
Complex A
U2 snRNP components
U2 related factors
CHLNCDRAFT_137938
Complex B
CHLNCDRAFT_137938
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
17358511
NCBI-ProteinID:
XP_005851228
JGI:
ChlNC64A_1_137938
UniProt:
E1Z4W2
LinkDB
All DBs
Position
Unknown
AA seq
1343 aa
AA seq
DB search
MGSPHERSRRDDREHKHKSSRDRDRSRSRDRRRSGRDDKERRRRSRSRSRSRSRDRHQKR
DRSAERDASRKRSRPEESLPSAEASGQPAQQFVQQAQPMMAAPAQLGAMPASTLEAARLQ
ALAGHDAEEQRRREREAEQVKLDAEMEKRRKRIQAWQEQRRKEEEAAAAAEAAAKAAAQP
DAAEAGAAAKQKAWTLEDESSDEDEGQAGVAAAADGDGDVEMPDAGGAAAPPAPAPAAAA
AEEEEEVDPLDAFMQANVLPAVKQQEASAAAPAAAAEEEEEVDPLDAFMQSNVLPAVQQQ
DTGASAEPGAAAKQDAGGKAAAPAPVAAAAAPAAANGEASSQPARPRRRSRYDTDSSEEE
PDSSAEEEEESEDEAEWMRKLIAGKLSKGEKLVAVDHAAIQYPPFRRNFYIEVPELARMS
GEEVEEYRKQLDGVKVRGKDVPKPVRNWNQCGLSTRILEVLKKGGFEQPLSIQAQALPGA
WLGCRGRCSLAAAPWPACSLIMSGRDCIGIAKTGSGKTLAFVLPMMRHVKDQPALANGDG
PVALAMAPTRELVTQASVLGWWWLMIGKEVKRFAKVVGLTCVCVYGGTGVANQITELKRG
TEIVVCTPGRMIDILVTSGGRITNLRRVTYLVLDEADRMFDMGFEPQIMRIVQNIRPDRQ
TVMFSATFPRQVEVLARQVLHNPVEIQVGGRSVVNKDITQFIEIRPEDDRFLRLLEILGE
WYERGKLLIFVSSQDRCDTLFRDLLRAGLHGGKDQSDRESTIVDYKANVCNILVATSVAA
RGLDVKDLVLVVNYDVPNHHEDYVHRVGRTGRAGAKGSAITFIGPDEEQYAPDLVKALKE
SGAPIPQDLAAMAEAFGKKRREGKAQLHSSGFGGSGFKFDASEDNAVKAYKKSVVKQTLK
AQGEEGEESESEDDGEIREVLGGKQAAVPTPPPPSAAEAQAQLLQQQLLKQQAAAAAAAP
AGAPPPVNPLQQIGITEEQLAAMPPEVQARVKAAQALASKLASQGPPAAPLVPPPVPQIP
AGGITALSALAAAWQPGMPLPGTVPGAMLPGAVPAAAAQPAAVAAAAATSSVTSTAAGAT
WQPAAQPPPPPGSPPPPENPILAAAQAAARRLGKEAGIPTTAYVSQQQQQQMAPGMAGMA
GMVGMQQQQMGMPGVLAPGSVPQLPPSLAAQMLPPGGGPMQLPMQLPMQPPALPGAVPQL
PPSLAAQMLPPGGGMMQLPMQPPGLPGGVAGQVAQPPVPTPSKHFETELEINDFPQHARW
KVTHRETIRDMGELGAAVIVKGKYYKLGTAPGPLDERKLYLHIEGPTAEVVKRAKQEIKR
LLEEFTEKAMRRETPAAGRYSVV
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcccacacgagcgctcccggcgtgatgaccgggagcacaagcacaagagcagc
cgggacagagaccggtcccgatccagggaccgccggcgcagcgggcgagacgacaaggag
cggcggcggcggtcacgctcccgctcccgctcccgcagcagggacaggcaccaaaagcgc
gaccgtagcgcggagcgagatgccagccgcaagcgcagcaggcccgaggagagcttgcct
tcagctgaggcatccggccagccggcccagcaatttgtgcagcaggcgcagccgatgatg
gcagcacccgcgcagctgggcgccatgccggcgtcaactctggaggcggctcggctgcag
gcgctggcggggcacgatgcggaggagcagcggcggcgggagcgtgaggcggagcaggtc
aagctggatgcggagatggagaagcggcggaagcgcatccaggcctggcaggagcagcgg
cgcaaggaggaggaggcggcggcggcggcggaggcggcagccaaggcggcggcgcagcct
gacgctgcggaggcgggggcggccgcaaagcagaaggcttggacgctggaggatgagtcg
tcggatgaggacgaggggcaggctggggttgcagctgctgccgacggcgacggcgatgtg
gagatgccagatgccggcggcgcggcggctccgcctgcgccggcaccagcggcggcggct
gcagaggaggaggaggaggtggatccgctagatgccttcatgcaggccaatgtgctgcca
gccgtgaagcagcaggaggcatcagcggcagcaccagcggcggctgcagaggaggaggag
gaggtggatcctctggatgccttcatgcaaagcaatgtgctgccggcagtgcagcagcag
gacacgggcgcgtcggcagagccaggggctgcagcgaagcaggacgccggcggcaaggcg
gctgcgcctgcgcccgtggcagccgcagcagctccagcagcagccaatggcgaggccagc
agccagccggcgcggccgcggcggcgctcgagatacgacaccgactcatcggaggaggag
ccggattcttcggccgaggaggaggaggagagtgaggatgaggcggagtggatgcgcaag
ctgattgcgggcaagctgtccaagggggagaagctggtggcggtggaccatgcggccata
cagtacccgcccttcaggcgcaacttctacatcgaggtgcctgagctggcgcgcatgagc
ggggaggaggtggaggagtaccgcaagcagctggacggcgtcaaggtgcgcggcaaggac
gtgcccaagcccgtcaggaactggaaccagtgcgggctgagcacgcgcatcctggaggtg
ctgaagaagggcggctttgagcagccgctgtccatccaggcgcaggcgctgccaggcgcg
tggctgggctgccgcggccgctgctccctggccgccgctccctggcctgcctgcagcctc
atcatgagcggccgcgactgcatcggcatcgccaagaccggcagcggcaagacgctggcg
tttgtgctgcccatgatgcgccacgtcaaggaccagccggcgctggccaacggggacggg
cccgtggctctggccatggctcccacacgggagctggtgacgcaggcgagcgtgctgggg
tggtggtggcttatgattggcaaggaggtcaagcggtttgccaaggtggtggggctgacg
tgcgtgtgcgtgtacggcggcaccggcgtggccaaccagatcaccgagctcaagcgcggc
acggagattgtggtgtgcacgccgggccgcatgatcgacatcctggtgaccagcggcggg
cgcatcaccaacctgcggcgcgtgacgtacctggttctggacgaggcggaccgcatgttt
gacatgggctttgagccgcagatcatgcgcattgtgcagaacatacgccccgacaggcag
acggtcatgttctcggccaccttcccgcgacaggtggaggtgctggcgcgccaggtgctg
cacaaccctgtggagatccaggtgggcggtcgcagcgtggtgaacaaggacatcacccag
ttcatcgagatccgccccgaggacgaccgcttcctgcgcctgctggagatactgggggag
tggtacgagcgcggcaagctgctcatctttgtgtcctcccaggaccgctgcgacacgctg
ttccgggacctgctgcgcgcgggcctgcacggcggcaaggaccagagcgaccgcgagtcc
accatcgtggactacaaggccaacgtgtgcaacatcctggtggccacgagcgtggctgcc
cgcggcctggatgtcaaggatctggtgctggtggtcaactatgatgtgcccaaccaccac
gaagattacgtgcacagggtggggcgcacggggcgtgcgggcgccaagggctccgccatc
accttcatcggccccgacgaggagcagtacgcgccagacctggtcaaggcgctcaaggag
agcggggcgcccataccgcaggacctggcggccatggctgaggcgtttggcaagaagcgg
cgggagggcaaggcgcagctgcacagctccggctttggcggcagcggcttcaagtttgac
gccagcgaggacaatgcggtgaaggcgtacaagaagtctgtggtgaagcagacgctcaag
gcgcagggcgaggagggggaagagtctgagtctgaggacgatggagagattcgggaggtg
ttggggggcaagcaggcggcggtgcccaccccgccgccaccctcggcggccgaggcgcag
gcccagctgctgcagcagcagctgctcaagcagcaggcggccgccgcggccgccgcgcca
gccggagcgccgccgcccgtcaacccgctgcagcagattgggatcacagaggagcagctg
gcggcgatgccgccagaggtgcaggcacgggtcaaggcggcacaggcgctggcctccaag
ctggcttcgcagggcccgccggcggcgcccctggtcccgccgccagtaccgcagatcccg
gcgggcggcatcacggcgctcagcgcgctggcggccgcctggcagcccggcatgccgctg
ccgggcacagtcccgggcgccatgctgcctggagcggttccggcagcggcggcgcagccc
gcagcagtagcagcagcagcagcaacgtcgtcggtgacgtccacggcggctggtgccaca
tggcagccggcggcgcagccgccgccgccgcctggcagccctccaccgccagagaacccg
atcctcgctgcggcacaggcggcggcgcggcggctgggcaaggaggcgggcattcccacc
acagcctacgtctcgcagcagcagcagcagcagatggcccctggcatggctggcatggct
ggcatggttggcatgcagcagcagcagatgggcatgccaggcgtgctggcgcctggcagc
gtgccgcagctgccgccgtcgctcgcggcccagatgctgccgccaggcggcgggccgatg
cagctgccgatgcagctgccgatgcagccgcccgcgctgcccggcgccgtgccgcagctg
ccgccgtcgctcgcggcgcagatgctgccgcctggtggcggcatgatgcagctgccgatg
cagccgcccgggctgcccggcggcgtggctgggcaggtggcgcagccccccgtgcccacc
ccatcgaagcactttgagaccgagctggagatcaacgacttcccgcagcacgcgcgctgg
aaggtcacccaccgcgagacgatccgcgacatgggcgagctgggcgccgccgtcatcgtc
aagggcaagtactacaagctgggcacggcgccggggccgctggacgagcgcaagctgtac
ctgcacatagaaggccccaccgcggaggtcgtgaagcgcgccaagcaggagatcaagcgg
ctgctggaggagttcacggagaaggcgatgcggcgggagacgcccgcggcggggcgctac
tcggtcgtctga
DBGET
integrated database retrieval system
