Chlorella variabilis: CHLNCDRAFT_25123
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Entry
CHLNCDRAFT_25123 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
cvr
Chlorella variabilis
Pathway
cvr03022
Basal transcription factors
cvr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CHLNCDRAFT_25123
09124 Replication and repair
03420 Nucleotide excision repair
CHLNCDRAFT_25123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvr03021
]
CHLNCDRAFT_25123
03400 DNA repair and recombination proteins [BR:
cvr03400
]
CHLNCDRAFT_25123
Transcription machinery [BR:
cvr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CHLNCDRAFT_25123
DNA repair and recombination proteins [BR:
cvr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CHLNCDRAFT_25123
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
17353649
NCBI-ProteinID:
XP_005846389
JGI:
ChlNC64A_1_25123
UniProt:
E1ZJ66
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MVEGLVSFITTSVRGEQLERLFVQPYAVVAILRSLPPLARHMLLRLASTAGTVPAGKRTL
ADSWATSDGSSKLSAALCELAELGLLAKEPHDGQVTYTVNAGFQAQLRRTMCSGCACPLP
GHPAAPVPSAAELDAYARRQWEALLLYLVNGNGTPPMAPPVLHATPIDIPSLLAAAGLMV
KDECTLEQKITEHGFQFLLANLYSQLWSAVRQYLTLLNTAGGADLAVAINFLLRLGLQGA
AAAMAHSQLDSAERTIAAHMCQLGLLMPVPGANELWLHPTRLAAVLAGGGRAGEAAVAPE
EGYVIVESNFRVYAYTTSAVQVAVLRVFVRCDALLPNLFVGTITRESATNALDTGIAADQ
VVAFLRQHAHPRAAAKTPTVVTDQIRLWAQELKRLQEKNATLYDKFESKELYVGAVAHAR
QLNALLYSCEDRRQLVVESAFHGLMVGHLKERKQALGL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggtggagggcctggtctccttcatcaccaccagcgtcaggggggagcagctggagcgc
ctgtttgtgcagccctatgcagtggtggccatcctgaggtccctgccgccgctagcccgc
cacatgctgctccgcctcgccagcaccgccggcaccgtccctgcaggcaagcgcactctg
gctgacagctgggcgacttcagacgggagtagcaagctttcggcagcactatgtgagctg
gctgagttgggcctgctcgccaaggagccacatgacgggcaggttacatacacagtgaat
gccggctttcaggcccagctgcggcgcaccatgtgtagcgggtgcgcatgcccgctgccc
gggcatccagcagcgcctgtaccatccgcggctgaactggatgcttatgcgcgacggcaa
tgggaggcgctgctgctgtatcttgtgaatggcaacggcacgccgcccatggcaccgccg
gtgctgcatgcaacgcccatcgacatccccagcctgctggctgccgcggggctgatggtc
aaagacgagtgcacactagagcagaaaatcactgagcacggctttcaattcctgctggcc
aacctgtacagccagctgtggagcgcggtgcggcagtacttgacgctcctaaacacggcg
gggggcgcggatctggctgtggccatcaacttcctgctgcgcctaggcctgcagggggca
gccgcagccatggcccacagccagctggacagcgccgagcgtaccattgcagcacacatg
tgccagctggggcttctgatgcctgtgccaggcgccaacgaactgtggctgcatcccacg
cgccttgctgcggtgctggcgggtggtggcagggcgggagaggctgcggttgcgccagag
gagggctacgtcattgtggagtccaatttcagggtgtatgcgtacaccacctcggcggtg
caggtggcggtgcttcgcgtgtttgtgcgctgcgatgcgctgctgcccaacctgtttgtg
ggcaccatcacgcgcgagtcggccaccaatgcgctggacacgggcatcgctgccgaccaa
gtggtggccttcctgcgccagcacgcccacccgcgcgccgccgccaagacgcccaccgtc
gtcaccgaccagatccggctgtgggcgcaggagctgaagcggctgcaggagaagaatgca
acgctgtatgacaagtttgagagcaaagagttgtatgtgggggcggtggcacatgcgcgc
cagctgaatgcgctgctgtacagctgcgaggatcggcggcagctggtagtggagtctgcc
ttccacggcctcatggtggggcacctgaaggaacgcaagcaggcgctgggcctctga
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integrated database retrieval system
