Chlorella variabilis: CHLNCDRAFT_53988
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Entry
CHLNCDRAFT_53988 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K24260
WD repeat-containing protein 11
Organism
cvr
Chlorella variabilis
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvr04131
]
CHLNCDRAFT_53988
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvr03037
]
CHLNCDRAFT_53988
Membrane trafficking [BR:
cvr04131
]
Endosome - Lysosome transport
Others
Others
CHLNCDRAFT_53988
Cilium and associated proteins [BR:
cvr03037
]
Other cilia and associated proteins
Other cilium assembly proteins
CHLNCDRAFT_53988
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5919
Motif
Other DBs
NCBI-GeneID:
17352532
NCBI-ProteinID:
XP_005845137
JGI:
ChlNC64A_1_53988
UniProt:
E1ZM23
LinkDB
All DBs
Position
Unknown
AA seq
1782 aa
AA seq
DB search
MARRLLLGRPLPSAVACERSSMHQGMREARGTLFAPIKQSTERRLGHSAMQVAPLDSLAH
LPGPPVKEKNRGAAAIHAGQLLAYAAASAVVVVDAQSLTVATTLAGAHRQAAVSALAWHP
GSGPREARAAAQLRLASGDEEGQVMVWNVNTGAVIAALEDPWASAFGGTAGAKRPESHGG
GGGGGGRPPVVGLAWATAAPSVLAVLLAPCILLLWDYRTGGVVWRKDFGGGEAFTGLVVD
PLDRRRLVMCGAKGSFVVLCLLNPASDRIRQQQYQVDLGGSGTLRAAFSATPDLLFLLLQ
REVGACSPGIAFPGHILLCCIVCVPSALQMFLGASWPHLGHEPCVCRMRWYCILSTSTMQ
IIVFDLEYGQPAASTPLPGSRPPLEDLLGCYGHAGAAAAAPAGKSLGEGGIDVLYCSHRD
GSVSVWQRHPRLLTYACLGASKLVPATAKFGPAPSLLALGAALWRGLEAPAAPDASSLLI
ATDGRRHPGMARRLSSGEVRGGGSGTAEGGDVAGDVPTGGGGEAGGRGAAEGSRGAAVVA
AVEQQAQQEAAGHAVLLMGVGSDGRVWQWQLPLLSGELPDAKAAASGLPPAPRPELLGLL
HTLPHKVTSFCACPVPVVLPGTAGGAAIAVVAAATAAGTIEVAAVQQGALLPLHLSISTS
LAAHPSSVHGLRWLGSTARLVSYSTEKLGDKGYRNTLLLTDVRNRVSTPFRAAGAADGVP
LAGLRASPSGRYLLLLFRGAPSEIWSVGGGAQPARLRQVELQFAAVEWLPPLPAGVTHDM
GPLAASAAAASAAAIGSPAATGAACSGGNPWAASPRAAERAAGGQAALPYQFLEESEEPP
EERLAFSLLDGRAGVLGIRGRRISDTRPRRPAWQALASGDFRAVAIGSWGQSVLLGDAEG
TLAHWDTVTGKCSVMETGYGRIHRICTSAPPAEALYPRLPGTAAVQARVALLFASGLFAA
YDLDLSGELWATHTTASAAAARVGRVTDVGWLPLPGTVGGGAVLAASLADGALALFDTVH
SIDVRPRRARMQRYRAALHTPPPPGAAGGAWGLAAAAPAAAPLLLPRAWALLLRLLLQRE
VPEVAFRELGTLAASIGHGTACGGAAVPGSMTVDAELALERLEADIWGRLPRACQAAWGA
LLAQRAEGGEGAAAAAAEGSSLMQLVESFGVDSDEDEAGAGGGGSTSMDVAAVAAGRDQR
GARESFEGSAVRDEAAAAALGLTSRQGSATGAAAAPGGGAGRRPVSQTFRSIGGAVKSQL
RSLAAGGGRGAQPLVAAVAGISDGFEYGQQRAGFQSLVAVLHAVATARGQPAVLSPAELA
AYGRALGRRQVAARMALAAELAGEACEAAFWRRLPATLRWLAAALAQQPTPRTSAGGGGD
GGAAAGRRLWDEGLQLAESGERSGWHEQMSRRVFEGSEDLQEKRVLEYVALGDFQTAVGF
LLASPPDRTTRYYRDALCTLGMAFACGLQQTALLAGPGGAGGLGSPRQPPPPSMLPAGSG
SMMAGTPAGATSAAVASTVEESAARTLFVQAAKVITANAAAVGDTLLGVPLLCSTGQHAD
AAALLQDSGLWRYAATLTAHALRRDPCCLCRARRLARPLAQRMQKRGAFLTCFPSCPPTH
RPTHALLAARAPAILCRGSERAAAVERWAGHVAAAEGRPWAAAGLLVAAGSLQSALTLLR
QHGLPDAAAALVSACKEAELPLQQHSVASGELANLFAGAGRGGPHAQPMQRFDGAGARLP
SPPAPGERPPAAPSLQRTLTDYERSEAAKEFQLYACELLQQL
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaggttgctactggggcgcccactcccatcggcggtcgcttgcgaacgatca
tcgatgcaccagggcatgcgggaggcgcggggcaccctattcgccccgatcaagcagtca
accgagcgccgtctggggcatagcgcgatgcaggtggcgccactggactcccttgcccac
ctgccgggtccgccggtcaaggagaagaaccgaggggcggccgccatccatgcgggccag
ctcctggcctatgccgccgcctcggcggtggtggtggtcgacgctcagagcctgaccgtg
gcgaccacgctggcgggagcgcaccggcaggcggccgtgtcggcactggcttggcacccc
ggcagcggcccgcgcgaggcgcgcgccgcggcgcagctgcgactggccagcggggacgag
gaggggcaggtgatggtgtggaacgtcaacacgggggcggtcattgcggcgctggaggat
ccctgggcctccgcctttggcggcacagccggggccaagcgccccgagagccacggcggc
ggcggcggcggcggcggccggccgccggtggtggggctggcctgggccaccgccgcgccc
agcgtgctggccgtcctgctggcgccctgcatcctgctgctctgggactaccgtacgggc
ggcgtcgtgtggcgtaaagactttggcggcggcgaggcgttcaccgggctggtggtggac
cctctggaccgccgccgcctggtgatgtgcggcgccaagggctcctttgtggtgctgtgc
ctgctcaaccccgcctccgaccgcatccggcagcagcagtaccaggtggaccttggcggc
agcggtaccctgcgcgccgccttcagcgccacgccagacctcctgttcctgctgctgcag
cgagaggtgggcgcctgcagcccagggatcgccttccctggacacatcttgctgtgctgc
atcgtgtgtgtgccctctgctctgcaaatgttcctcggagcatcgtggccccatcttggc
cacgagccatgcgtctgccgcatgcgatggtactgcattttatccaccagtaccatgcag
atcatcgtgttcgacctggagtacggccagcctgcggcttccacgccgctgccgggaagc
cgcccgccgctggaagacctgctgggctgctacgggcatgcaggcgcggcggcggcggcg
cccgcgggcaagtctctgggcgagggcggcatcgatgtgctgtactgctcgcaccgcgat
ggaagcgtgagcgtgtggcagcgccacccccgcctcctcacctacgcctgcctgggggcc
agcaagctggtgcccgcgacggccaagtttgggccggcgcccagcctgctggcgctggga
gcggcactgtggcgcgggctggaggcgcctgcggcgcccgacgcctcctccctgctgatc
gccacagacggcaggcgccatccgggcatggcccgccgcctgtcctcaggagaggtccgg
ggtggcggcagcggtaccgcagagggcggcgacgtggccggggacgtgccgaccggcggc
ggcggcgaggccggcggccgcggagccgccgagggctcccgcggcgcggcggtggtggcg
gcggtggagcagcaggcgcagcaggaggctgcggggcacgccgtgctgctcatgggggtg
ggcagcgacgggcgggtgtggcagtggcagctgccgctgctcagcggcgagctcccggac
gccaaggccgccgcctctggcctgccgcctgcacccaggcctgagctgctaggcctgctg
cacacgctgccgcacaaggtcaccagcttctgcgcctgcccggtgccggtggtactgccc
ggtaccgccggcggcgccgccatcgccgtcgtggcagccgccaccgcggccggtaccatc
gaagtggcggcggtgcagcagggggcgctgctgccgctgcacctcagcatcagcacatcc
ctggccgcccacccctcctccgtgcatggcctgcgctggctgggctccaccgcccgcctc
gtgtcctacagcaccgaaaagctgggggacaaagggtaccgcaacacgctgctgctgacg
gacgtgcgcaaccgcgtgagcacgcccttccgcgcagcaggcgcggcagacggggtgccg
ctggcgggcctgcgcgcctcgccctcgggccgctacctgctgctcctcttcaggggcgct
ccgtctgagatctggtcggttggcggcggcgcccagcccgcccgcctgcgccaggtggag
ctccagtttgcggcggtggagtggctgcccccgctgccggcgggagtgacccacgacatg
ggccccttggctgcctccgccgcagccgcctcggctgccgcaatcggcagccccgcggcc
acaggggcggcctgcagcgggggcaacccctgggcagcctcacccagggcggcggagcgg
gcggccggcgggcaagcggcgctgccctaccagttcctggaagaaagcgaggagccgccc
gaggagcggctggccttctccctgctcgacgggcgggcgggcgtgctgggcatacgcggg
cgccgcatcagcgacacccggccgcgccgacccgcctggcaggcgctggcctcgggagac
ttccgggcggtggccatcggctcctggggccagtctgtgctgctgggggatgcagagggc
acgctggcgcactgggacacagtgaccggcaagtgctcggtcatggagacgggctacggc
cggatccaccgcatctgcacctctgccccgcccgcagaggccctctacccccgcctcccc
ggcaccgcggcagtgcaagcccgcgtggccctgctgtttgccagcggcctgtttgccgca
tacgacctggatctgtctggagagctatgggccacgcacaccaccgccagcgcggcggcg
gcacgcgtggggcgcgtgacggatgtcggctggctgccgctgccggggaccgtgggcggc
ggcgcggtgctggcggcctcgctggccgacggcgccctcgcgctgtttgacacggtacac
agcatcgacgtgcggccccgccgcgcccgcatgcagcggtaccgcgccgcgctgcacacg
ccgccgccccccggcgccgccggcggcgcctggggcctggcagccgcggcgcccgcggcg
gcgccgctgctgctgccacgcgcctgggcgctgctgctgcgcctgctgctgcagcgcgag
gtgccggaggtggcgttccgggagctgggcacgctggccgcttccatcggccacggtact
gcatgcggcggtgccgcggtaccgggcagcatgacggtggatgctgagctggcgctggag
cggctggaggcagatatctggggccgcctgccccgcgcctgccaggcggcctggggggcc
ctcctggcgcagcgcgcggagggcggcgagggcgcggcggcggcggcggcagagggttcc
tctctgatgcagctggttgagagctttggggtggactcagacgaggatgaggccggggcc
ggcggcggcggtagtaccagcatggatgtggcggcggtggcggcggggcgcgaccagcgc
ggggcgcgggagtctttcgagggctctgccgtacgggacgaggcggcggcggccgcgctg
gggctgaccagccgccagggcagcgccacgggggcggcggccgcgccgggcggcggcgcg
ggccgcaggcctgtgtcccagaccttcaggagcatcggtggcgcggtgaagagccagctg
cggtcgctggcggcgggcggcgggcgcggcgcgcagccgctggtggcggcggtggcgggc
atctccgacggctttgagtacgggcagcagcgggcgggcttccagtcgctggtggctgtg
ctgcacgcggtagccaccgcccgcggccagcccgcggtgctctcccctgctgagctggcg
gcgtacgggcgggcgctgggcaggcgccaggtggccgcccgcatggcgctggctgctgag
ctggcgggggaggcgtgcgaggcggccttctggcgccgcctgccagcgaccctgcgctgg
ttggcggccgcgttggcgcagcagcccacgccgcggacctccgccggcggcggcggcgac
ggcggcgcagccgccgggcgccggctgtgggatgaggggctgcagctggccgagagcggg
gagcggtcggggtggcacgagcagatgagccgcagggtgtttgaggggtcggaggacctg
caggagaagcgggtcctggagtacgtggcgctgggcgacttccagacggccgtcggcttc
ctgctggcttccccgcctgaccgtaccacgcggtactaccgtgacgcgctgtgcacgctg
ggcatggcctttgcctgcggcctgcagcagaccgcgctgctggcggggcccggcggcgcc
ggcgggctgggctcgccgcggcagccgccgccgcccagcatgctgccggcggggagcggc
agcatgatggcgggcacgccagctggcgccacctcagcggccgtggccagcaccgtggag
gagtctgcggctcggacgctgtttgtgcaggcagccaaggtcatcacagccaacgcggcg
gcggtgggggacacgctgctgggcgtgccgctgctgtgctccacaggccagcacgcagat
gctgcagcgctgctgcaagactcgggcctgtggcgctacgccgccaccctcaccgcccac
gccctcaggcgcgacccctgctgcctttgccgggcgcggcgcctggcccggccgctggcg
cagcgcatgcagaagcggggcgctttcctcacatgctttccttcctgcccacccacccac
cgacccacgcatgcactcctggccgcgcgtgcgcctgccatcctgtgcaggggctcggag
cgagcggcggcggtggagcgctgggcggggcacgtggcggcggcggaggggcggccctgg
gcggccgcggggctgctggtggcggcaggctcgctgcaatccgccctcaccctgctgcgc
cagcacggcctgcccgacgcggcggctgcgctggtcagcgcctgcaaggaggccgagctg
ccgctgcagcagcacagcgtggccagcggggagctggccaacctgtttgcgggggcggga
cgcggcgggccgcacgcccagcccatgcagcgctttgacggcgccggcgcgcgcctgccc
agcccgcccgccccgggggagcggccgccggcggcgccctccctgcagcgaaccctcacc
gactacgagcgcagcgaggcggccaaggagttccagctgtacgcctgtgagctgctgcag
cagctgtag
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