Chlorella variabilis: CHLNCDRAFT_8472
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Entry
CHLNCDRAFT_8472 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
cvr
Chlorella variabilis
Pathway
cvr03082
ATP-dependent chromatin remodeling
cvr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CHLNCDRAFT_8472
03083 Polycomb repressive complex
CHLNCDRAFT_8472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvr03036
]
CHLNCDRAFT_8472
Enzymes [BR:
cvr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
CHLNCDRAFT_8472
Chromosome and associated proteins [BR:
cvr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
CHLNCDRAFT_8472
HDAC complexes
Sin3A-HDAC complex
CHLNCDRAFT_8472
BRAF-HDAC complex
CHLNCDRAFT_8472
REST complex
CHLNCDRAFT_8472
SHIP complex
CHLNCDRAFT_8472
MiDAC complex
CHLNCDRAFT_8472
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
CHLNCDRAFT_8472
Heterochromatin formation proteins
Other heterochromatin formation proteins
CHLNCDRAFT_8472
Chromatin remodeling factors
NuRD complex
CHLNCDRAFT_8472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Gp_UL130
Motif
Other DBs
NCBI-GeneID:
17354572
NCBI-ProteinID:
XP_005847495
JGI:
ChlNC64A_1_8472
UniProt:
E1ZG34
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
KNRVSYFYDPDIGQFFYGQGHPMKPHRVRMTNSLVLHYGLHSKLEYYTPTRARAEDMKAF
HADDYVDFLQNINPDNLSQFTRELREYNMYEDCPVFSGLYEYCQISAGGSLGAAVKLNYQ
TADIAINWAGGLHHAKRSEASGFCYFNDIVLAVLELLKYHQRVLYLDIDVHHGDGVEEAF
LTTDRVMTVSFHKFGGGYFPDTGDIHNCGQGKGLGYSLNVPLRDGITDEAYHQLFRPVML
KVMEVFQPEVVVLQCGTDSLAGDRLGVFNLSSTGHAACIDFMKGFGLPLMLLGGGGYKII
NVARCWAYETGLAVGADMDEKLPPNEYYDYYGPVGYTLTVKPTSRWEDQNSAEYLEGLRQ
TILERLSRLAAAPSVGFHERAPD
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
aagaaccgggtgtcttacttttatgaccccgacatagggcagttcttctacggacagggc
caccccatgaaaccgcaccgcgtgcgcatgaccaacagcctggtgctgcactacggcctg
cacagcaagctggaatactacacccccacccgcgccagggccgaggacatgaaagccttc
cacgctgacgactatgtcgatttcctgcaaaacatcaaccccgataacctgagccagttc
acccgagagctaagagagtacaacatgtacgaagactgccccgtgttcagcggcctgtac
gagtactgccagatctcggcgggcggcagcctgggcgctgcagtcaagctcaactaccag
accgccgacatcgccatcaactgggcgggcggcctgcatcacgccaagcgctcagaggcc
tccggcttctgctacttcaacgacatcgtgctggcggtgctggagctgctcaagtaccac
cagcgggtgctgtacctcgacatcgacgtgcaccacggcgacggcgtggaggaggccttc
ctgaccaccgaccgagtcatgaccgtgtccttccacaagtttggtggcggctactttcct
gacacaggagacatccacaactgcggccagggcaagggcctgggctactcgctcaacgtt
ccgctgcgggacggcatcacggacgaggcctaccaccagctgttcaggcccgtcatgctc
aaagtgatggaggtgttccagccagaggtggtggtactgcagtgcggcaccgactctctg
gcgggcgaccggctgggggtgttcaacctcagcagcaccggccacgccgcatgcatcgac
ttcatgaagggatttgggctgccgctgatgctgctgggaggcgggggctacaagatcatc
aatgtggcgcgctgctgggcctacgaaacagggctggcggtgggcgcggacatggatgag
aagctgccccccaacgaatactacgactactacggcccagtggggtacacgctgactgtg
aagccgacgtcgaggtgggaggaccagaactcagcagagtatctggagggcctcaggcag
accatcctggagcgcctgtcgcggctggcggccgcgcccagcgtgggcttccacgagcga
gcccccgac
DBGET
integrated database retrieval system