KEGG   Chlorella variabilis: CHLNCDRAFT_8472
Entry
CHLNCDRAFT_8472   CDS       T02924                                 
Name
(RefSeq) hypothetical protein
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
cvr  Chlorella variabilis
Pathway
cvr03082  ATP-dependent chromatin remodeling
cvr03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cvr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    CHLNCDRAFT_8472
   03083 Polycomb repressive complex
    CHLNCDRAFT_8472
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cvr03036]
    CHLNCDRAFT_8472
Enzymes [BR:cvr01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     CHLNCDRAFT_8472
Chromosome and associated proteins [BR:cvr03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     CHLNCDRAFT_8472
   HDAC complexes
    Sin3A-HDAC complex
     CHLNCDRAFT_8472
    BRAF-HDAC complex
     CHLNCDRAFT_8472
    REST complex
     CHLNCDRAFT_8472
    SHIP complex
     CHLNCDRAFT_8472
    MiDAC complex
     CHLNCDRAFT_8472
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     CHLNCDRAFT_8472
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    CHLNCDRAFT_8472
  Chromatin remodeling factors
   NuRD complex
    CHLNCDRAFT_8472
SSDB
Motif
Pfam: Hist_deacetyl Gp_UL130
Other DBs
NCBI-GeneID: 17354572
NCBI-ProteinID: XP_005847495
JGI: ChlNC64A_1_8472
UniProt: E1ZG34
LinkDB
Position
Unknown
AA seq 383 aa
KNRVSYFYDPDIGQFFYGQGHPMKPHRVRMTNSLVLHYGLHSKLEYYTPTRARAEDMKAF
HADDYVDFLQNINPDNLSQFTRELREYNMYEDCPVFSGLYEYCQISAGGSLGAAVKLNYQ
TADIAINWAGGLHHAKRSEASGFCYFNDIVLAVLELLKYHQRVLYLDIDVHHGDGVEEAF
LTTDRVMTVSFHKFGGGYFPDTGDIHNCGQGKGLGYSLNVPLRDGITDEAYHQLFRPVML
KVMEVFQPEVVVLQCGTDSLAGDRLGVFNLSSTGHAACIDFMKGFGLPLMLLGGGGYKII
NVARCWAYETGLAVGADMDEKLPPNEYYDYYGPVGYTLTVKPTSRWEDQNSAEYLEGLRQ
TILERLSRLAAAPSVGFHERAPD
NT seq 1149 nt   +upstreamnt  +downstreamnt
aagaaccgggtgtcttacttttatgaccccgacatagggcagttcttctacggacagggc
caccccatgaaaccgcaccgcgtgcgcatgaccaacagcctggtgctgcactacggcctg
cacagcaagctggaatactacacccccacccgcgccagggccgaggacatgaaagccttc
cacgctgacgactatgtcgatttcctgcaaaacatcaaccccgataacctgagccagttc
acccgagagctaagagagtacaacatgtacgaagactgccccgtgttcagcggcctgtac
gagtactgccagatctcggcgggcggcagcctgggcgctgcagtcaagctcaactaccag
accgccgacatcgccatcaactgggcgggcggcctgcatcacgccaagcgctcagaggcc
tccggcttctgctacttcaacgacatcgtgctggcggtgctggagctgctcaagtaccac
cagcgggtgctgtacctcgacatcgacgtgcaccacggcgacggcgtggaggaggccttc
ctgaccaccgaccgagtcatgaccgtgtccttccacaagtttggtggcggctactttcct
gacacaggagacatccacaactgcggccagggcaagggcctgggctactcgctcaacgtt
ccgctgcgggacggcatcacggacgaggcctaccaccagctgttcaggcccgtcatgctc
aaagtgatggaggtgttccagccagaggtggtggtactgcagtgcggcaccgactctctg
gcgggcgaccggctgggggtgttcaacctcagcagcaccggccacgccgcatgcatcgac
ttcatgaagggatttgggctgccgctgatgctgctgggaggcgggggctacaagatcatc
aatgtggcgcgctgctgggcctacgaaacagggctggcggtgggcgcggacatggatgag
aagctgccccccaacgaatactacgactactacggcccagtggggtacacgctgactgtg
aagccgacgtcgaggtgggaggaccagaactcagcagagtatctggagggcctcaggcag
accatcctggagcgcctgtcgcggctggcggccgcgcccagcgtgggcttccacgagcga
gcccccgac

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