Synechococcus sp. JA-3-3Ab: CYA_0322
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Entry
CYA_0322 CDS
T00318
Name
(GenBank) putative helicase
Organism
cya
Synechococcus sp. JA-3-3Ab
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
ABC98543
CyanoBase:
CYA_0322
UniProt:
Q2JXE3
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All DBs
Position
complement(338498..341392)
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AA seq
964 aa
AA seq
DB search
MQPGSIVCCRHREWVVLPADSEEGVVLRPLTGTPEDAIHIHRQLMNLVGGTLPFERIEPA
FFPLPCADRVADAAAAHLLWQAARLILREGATPFRSLGRISIRPRTYQFVPLLMALRLDP
VRLFIADDVGVGKTIEALLIARELLDRGEIRRFCVLCPPYLCEQWARELAEKFHLEPVVI
RSGTVGQLERQTPLGQSLYEYFPVQVASIDFVKTERNRPQFLQFCPELIIADEVHGAAAA
SSGRAQQERHALLRAIAQAPNRHLILLTATPHSGIPEAFRSLLGLLRPEFEAWDFQDLTE
SQRLELARHFVQRTRRDIKETWQETACFPSREAEDETYDLSPRYRELFERTYAFCAELVR
TGQQMEQRRRRVRYWGALALLRCVMSSPAAALAALANRGAGSREEEAEEAEESFSRWVFE
SAEERTDDELPLPALEAADQTLPDSDRRRLRELARLAGQLRGVDQDTKLARAIELVKRLL
KESFHPILWCRYVATAEYLADHLRQHLGSATQVACVTGRMGDEEREAKIAEMAVDQPRVL
VATDCLSEGINLQEKLTAVIHYDLPWNPNRLEQREGRVDRYGQRAPRVKVIRFFGRDNPV
DGVVLKVLLNKVREIRRTLGTHVPVPEASESVTQAVLEALFLRQGSGSGERQLELDLGMA
EVSRFHARWDRSAEQERRNRTRFAQRSLKPEEVQRELEATDAVLGDPQAVQQFFLAAAQR
LGLAVIPDRQSGVFQVNLSREGTATLPEAIRSALPQPKGGHWRISFVSPTPEGAEYVGRN
HRLIAALAHFLLEKALDNPEEAVVSRCGVVRTRAVAELTTLLLLRVRYLVEQPLAQPLLA
EEVLVLGGVGLERGAARWLETGAALQLLAKATPDANLPLAEKQELVQHVLDSLSPWPPTA
ENWGLGHPLQQGIREAICRRAGELADAHRRIRQAISQRVRGLEVKPQFPPDLLGILVLQP
LLSR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctggctcaattgtttgctgccgccaccgcgagtgggtggtgctccccgctgat
tccgaagaaggggtagtgctgcggccccttactggtacgccagaggatgcgattcacatt
caccgacaactgatgaaccttgtaggcggcaccttgccctttgagcgcatcgagccggcc
ttcttcccgctgccctgcgccgaccgagttgccgatgctgcagccgcccatctcctctgg
caggcagcgcggcttatcttgcgcgagggcgccactccctttcgctcgctggggcgcatc
tccatccggccccgaacctaccagtttgtgccgttgctcatggcgctgcgccttgatccg
gtgcggctgtttattgccgacgacgtgggagtgggcaagaccatcgaagcgctgctgata
gccagagaacttctggatcgcggcgagatccggcgcttttgtgtcctttgcccgccttat
ttgtgcgagcagtgggccagggagctggccgagaagtttcacctcgagccggtagttatc
cgctcggggacggtagggcaactggagcggcaaaccccgctgggacagagcctctacgaa
tacttcccggtgcaggtggccagcattgattttgtcaaaacagagcgcaaccgccctcaa
tttttacagttttgtcctgagctgatcattgccgacgaagtgcacggtgcggcggcggcc
agttccggcagagctcagcaggagcggcatgcccttttgagagccattgcccaagcgccc
aaccgccacctgattctgctgacggctactccccacagcggcatcccagaggccttccgt
tccttgctggggctgctgcggcctgagtttgaggcgtgggactttcaggatctcactgag
agccagcgcctcgagctggcccgtcactttgtccagcgcacgcggcgggacattaaggag
acctggcaagaaaccgcctgcttcccaagccgagaagctgaagatgagacctatgacctt
tcgccccgctaccgcgagctgtttgagcgcacctatgccttctgcgcggagctggtgcgc
accggccagcagatggaacagcggcggcggcgagtacgctactggggggcgctggctctt
ttgcgctgtgtcatgtccagtccggcagcggccttggcagcgctggccaatcgcggtgca
ggctcccgggaggaagaagctgaagaggccgaggagagctttagccgctgggtgttcgag
tcagcagaagagcgtactgacgacgaattaccgctgccagccctcgaagcagcagatcaa
actctgcccgacagcgaccgccgccggctgcgcgagctcgcccgcctggctggtcaactg
cgtggcgtagaccaagacaccaagctggcgcgggccatcgagctagtgaagcggctcctc
aaagagagctttcaccccattctctggtgccgctatgtggccacggcggagtatcttgcc
gaccaccttcgacaacacctgggatccgcaactcaggtagcctgcgtaaccggccgcatg
ggcgacgaggagcgggaggccaagattgcggaaatggccgttgaccagccacgggtgctg
gtggccaccgactgcctctcggaagggatcaacctgcaggaaaaattgacagccgtcatc
cactacgacctgccctggaaccccaaccggctggagcagcgggaggggcgggtggatcgc
tacggccaacgggccccccgggtcaaggtcattcgtttttttgggcgagataaccctgtg
gacggcgtggtgctaaaggtgctgctgaacaaggtgcgggaaattcgccgcacccttggc
acccacgtgcctgttcccgaagcgagtgaaagcgttacccaggcggtgctggaggcgctt
tttttgcgccagggatccggctcaggggagcgccagttggagctggatctggggatggca
gaggtgagccggtttcacgcccggtgggatcgctctgccgagcaggagcggcgcaaccgc
acccgttttgcccagcgatccctcaagcctgaagaagtgcagcgggaactggaggctaca
gacgccgtgctgggggatccgcaggcagtacagcaattttttctcgctgccgcccagcgc
ctgggcctggccgtgatccctgaccggcagtctggagtcttccaggtcaacctcagccga
gagggcacggcaaccctgccggaggccattcgttcagccctgccccagcccaagggtgga
cactggcggattagctttgtctcccccacgccagaaggagcggagtacgttggccgcaac
caccgcctcatcgctgccctggcccactttttgctggagaaggctctagataatcctgaa
gaggccgtcgtctcccgctgcggggttgtgcggacgcgggctgtggccgagctcaccacc
ctcttgttgctgcgcgtgcgctacctggtggagcagccgctggctcagcctctgctggcg
gaggaggtgctggtgctgggaggggttggcctggaaagaggcgcagcccgctggctggaa
actggggcagcgctccagcttttggccaaagccacgccagatgccaacctgccgctcgcg
gaaaagcaggagttggtgcagcatgtgctagacagcctcagcccctggccgccgactgca
gaaaactggggcctaggacacccccttcagcaagggatccgggaggccatttgccggcgg
gctggcgagctggctgatgcccacaggcgcatccgacaggctatctcccagcgcgtgcgc
gggctggaggttaagccgcagtttcccccggatctgctgggaattcttgtcctacaacct
ctgctgtccagatga
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