Synechococcus sp. JA-2-3B'a(2-13): CYB_0566
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Entry
CYB_0566 CDS
T00319
Symbol
cobA_hemD
Name
(GenBank) uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
cyb
Synechococcus sp. JA-2-3B'a(2-13)
Pathway
cyb00860
Porphyrin metabolism
cyb01100
Metabolic pathways
cyb01110
Biosynthesis of secondary metabolites
cyb01120
Microbial metabolism in diverse environments
cyb01240
Biosynthesis of cofactors
Module
cyb_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
cyb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
CYB_0566 (cobA_hemD)
Enzymes [BR:
cyb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
CYB_0566 (cobA_hemD)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
CYB_0566 (cobA_hemD)
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Gene cluster
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Motif
Pfam:
HEM4
TP_methylase
Motif
Other DBs
NCBI-ProteinID:
ABD01557
CyanoBase:
CYB_0566
UniProt:
Q2JNU8
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Position
complement(575976..577478)
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AA seq
500 aa
AA seq
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MGKVYLVGAGLGGRAGLTQGALEILRQAEAIWIDELVDERLLAELPPQAQVWRRSGPGSL
QEGIHWLIQRCREGKQVVHLKSGDPLIFGRAREEIQALREAGCPFEIWPGLSSALAGPLW
AGIPLTDKHLSRVFAVLTAHDLEALPWSALAQLDTLVILMGSRQRQHIGARLMESGIPAD
RPVALIWGAGQAEQQVWVGTLAELQQGESQAKLPGLLVVGEVIRLRQDFLPGIPPLPPPA
PLAGKTVLVTRSEGQSPAFRELLQAQGARVLEMPTLVIQPPTCWDPLDAAIARLGQFNWL
LLTSANGVQAFFERLHRQGRDSRALHPVQVAVVGSKTASVLAQYGIHPDLMPQEFVAEAL
LQVWPEPISGQRILFPRVESGGREEVVQGLRQRGAEVVEVAAYQSACPAAADPQVLEALK
AHQVDILTFASSKTVQHFAHLIRQAGLGPEIWDPPVQIAAIGPKTAATCKAAFGRVDIAA
QEYTLEGLVEALIQATNRST
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggtgtatctagtgggggcagggctgggcgggcgggcgggcctgacgcaggga
gcactggagatcctacggcaggctgaggctatctggatcgacgagctggtggatgagcgc
ttgttggcagagttgccgccgcaggcgcaggtgtggcgacgctctgggccaggaagcctc
caggagggcatccactggctcatccagcgctgccgagaaggcaaacaggtggttcacctc
aagtcaggggatcccttgatctttggccgcgctcgcgaagagatccaagcccttagggag
gcgggctgtccctttgagatttggccggggttgtcgtcggccctggctggccccctctgg
gcagggatccccctgaccgataagcacttaagccgcgtttttgccgtgctgactgcccac
gatctagaggccttgccctggagcgccctggcccagttggatactttggtgattttgatg
ggatcccggcagcgacagcacattggcgcacggctgatggagtctgggatcccggcagac
cgaccggtggccttgatctggggggcggggcaagcagagcagcaggtgtgggtgggcacc
ttggccgagctgcagcagggggagagtcaggcaaagttgccgggcctactggtggttggg
gaggtgatccggttgcggcaggactttttgccggggatccctcctttgcctccgccggct
cccctggcaggcaagacggtgctggttacccgttctgaggggcaatcgccagcttttcgg
gagctgctacaggcccagggagcgcgggtgctggaaatgcccaccctggtgatccagccg
cccacctgttgggatcccttggatgccgccattgcccgcctgggccaattcaactggctg
ttgctgacttcggccaacggggtgcaggctttctttgagcggttgcaccggcaaggtcgg
gacagtcgggctctccaccccgtacaagtggcggtggtgggatccaagaccgcttccgtg
ctcgcccagtacggcatccatcccgatctcatgccccaagagtttgtggccgaggccctg
cttcaagtttggccggagccgatctcagggcagcggattctctttcccagagtggagtcg
ggaggccgggaggaggtggtacagggtttgcggcagcgaggggcagaggtggtggaggtg
gccgcctatcagtctgcctgtccagcagcagcggatccccaggtcctggaagctcttaaa
gcccaccaggtggacatcctcacctttgccagctccaagacagtacagcattttgcccac
ttgatccggcaggcagggctaggccctgagatctgggatccacccgtgcagattgccgcc
attggccccaagacggccgcaacctgcaaggctgcatttggtcgagtggacatcgcagcc
caggagtatactttggaaggattggtggaagccctcatccaagcgaccaaccgttctacc
tag
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