Synechococcus sp. JA-2-3B'a(2-13): CYB_1696
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Entry
CYB_1696 CDS
T00319
Name
(GenBank) ATP-dependent helicase, DEAD/DEAH box family
Organism
cyb
Synechococcus sp. JA-2-3B'a(2-13)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
ResIII
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
ABD02656
CyanoBase:
CYB_1696
UniProt:
Q2JKX2
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All DBs
Position
complement(1774441..1779645)
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AA seq
1734 aa
AA seq
DB search
MGEAGALPIPLRRYLFAVQRAVDLGGCGFKHHLRHLQARLELTKRALRADSMSTIFDLHA
TVLDDYRDFVRSFFLIGDQRAQAFVNQALEEGIHLWPEPLLQLSPSYVSGPTVDELAEAG
RIAQETARIFRFEDGRPFRLYRHQEEAIAKALAGESFVVTSGTGSGKSLCYFLPILDNWI
RQGGSLGQVTALVVYPMNALVNSQYQSLQTLHERYERAYHRPFPLRFAKYTGETAESDRE
DLRRDPPQILLTNYVMAELLLVRPEDQRFLSSNGLRFLVFDELHTYRGRQGADVAMLVRR
LKGRCAAKDLVHIGTSATMIARPEASALERRQTVADFASRFFGHPFTPEQIIEETLAPLS
ESGPPSPEELKPALDPPWPTDLASLRRHPLMRWLEYELGLEQSPDGSFRRRVPRELSKVA
AQLAELTSTTPESCTESLRQFLAHASSLREGSSRGPALKLHQFISQGRTLYATLESRDKR
QFSLEGQVQAGEGKLFFPVKFCRHCGQDYYHVLRSKTHFLPYPLGEEVEEGEDQQAGYLS
LDPIDNEWSPEQIPEDWYTPENRLKPHWKKRVPQAVWVRPDGSFSEVPQAEAQKLWWQPQ
PFSLCLACGEYYSGREREFAKLASLSSEGRSSATTILATSLLRHAAQTGAARGKLLTFTD
NRQDASLQAGHFNDFVHVALLRASLYAALQEKKELDFSEVAPAVVQASGLSLADITQNPD
LDPDSPSAEEVWQTFSELTEYRLYEDLRRGWRVTHPNLEQVGLLKIEYRSLRELCQGSAL
APLHPWFVQAEVEERERLLRAVLDQFRRKLAIDVRLLKAESQRTLRRRAEQHLNEFWGLE
EYDELRTATCFVRQSCDGKDITTFSLGPRSALGRFLAKRLGLTRETYDELLGSLLSLLVS
YDLLRRHSENGQEAYQLNAGCLRWCLGNGSPPPDPLYSRRAEQSGYSSARRPVNLFFQRL
YQAGAAGLGSLEAREHTAQVVRPGEREQRERRFRGEDQARRLPYLVCSPTLELGVDIADL
DLVHLRNVPPTPANYAQRSGRAGRQGQPGLIITYCGAFNSHDQYYFRRRPEMVAGRVRPP
RLDLANESLLRAHIHAVWLAQVRLPLGNSIETVIDADREELPLRETVAQQIQLEESARQQ
VKEQVQKLLAADRQLLDKSGWFSERWLQQVIEEAPQAFDRAFDRWRELYRAATQQLEAAN
RQLQTTRQKKDQQEAERRQQEALRQRNLLLQIGTQREESDFYPYRYLASEGFLPGYNFPA
LPVRAWVPRGSEGEFIARPRFLAIREFAPHNFLYHEGCQWEAVAFQAPPGGLEERKSSHK
LCFSCGAFADPHLDCCPVCGTQFDGQNSLFTQLLEMPNVRMRRRNRITADEEERRRQGYE
LQTFFQFAPESSGYRVQEADVLSGQTPLLQLRYAPAATLLRINHGWRGSGGRGFLVNFEN
GEVPSRDQLERNRAGSSNPVPLQSIRLAVRSTQNLLLVRLVQPGVENPQALETTLRYALK
RGIEETFELEETELAAECIGQGSHQAMLFYETAEGGAGVLRRLVEEPQALAEVAQVALEI
CHFQLSEAGIQDLRPECRAACYECLLSYANQREALQLDRYQIRDLLGLLVNSRTELRSLG
RSRQEHLEWLRQLLDPRSELERRFLETLAAGGYRLPEDAQKAIADPDCVVDFFYSPNICI
FCDGPVHDQPAQAERDRQLRSQLQGRGYRVLVLRYNQDLQEQLARYPEVFGKGS
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
gtgggggaagctggcgcattgccgatcccacttcggagatatctttttgccgttcagcgg
gccgtagatcttggtgggtgcggtttcaaacaccacttgcggcatcttcaagctaggctt
gagctaaccaagcgggccttaagggcagattcgatgtccaccatctttgatctccacgcc
actgttctggacgactatcgcgattttgtccgctccttttttctcattggcgaccaacgg
gcgcaagcctttgtgaatcaagctctagaggaagggatccacctctggccagaacccctc
ctccagctcagccctagttatgtatctggtccaaccgttgacgagttggccgaggcgggg
cgcattgcccaagaaacagcccgcattttccgctttgaggatggcagacccttccgcctc
taccgccaccaggaggaggccatcgccaaagccttggcaggggaaagctttgtggttacc
agcggcaccggctccggcaaaagcctttgctacttcctgcccattctcgacaactggatc
cgccaggggggatccctgggccaggtgacggccctggtggtctatcccatgaacgccctg
gttaactcccaataccagtctttacaaactctgcacgagcgctacgagcgcgcctaccat
cgcccttttccgctgcgctttgccaagtacaccggggaaactgcagaaagcgaccgggaa
gatctgcgccgggatccgccccaaattctgcttactaactacgtgatggcggagctgctt
ttggtgcgccccgaagatcagcgctttttaagttccaacgggctgcgcttcctggtcttt
gacgagctgcacacctaccgaggccggcagggggccgatgtggcgatgctggttcgccgc
ctcaagggacgctgcgccgccaaggacttggttcacatcggcaccagcgccaccatgatt
gctcggccagaggccagtgccctggagcgccgccagaccgtggccgacttcgccagccgc
ttctttggccatcccttcacaccggagcagattatcgaggagaccctggcccctttgagc
gaaagtggcccgccttcacctgaagagctcaaacccgccctcgatcccccctggcccacc
gacctagctagcctgcgccgccaccccttgatgcgctggttggagtacgagctgggcctg
gagcaaagtcccgatggcagcttcaggcgccgcgtgccccgggagctttccaaggtagct
gcccaactggcagagctgaccagcactacccctgagagctgcaccgagtccctacgccag
tttctggcccacgccagcagcctgcgggagggctctagccgcggcccggccttgaagttg
caccagtttatctcccagggccgcaccctctatgccaccctggaaagtcgggacaagcgg
cagttttccctggaaggacaagtgcaagcaggggaaggaaagctgtttttccccgtcaag
ttctgccgccactgtggccaggactactaccacgtcctcaggtcaaagactcacttcctg
ccctatcctctgggggaagaggttgaggaaggcgaagaccagcaggccggctacctcagc
ttggatcccattgacaacgagtggtcgccagagcagatcccggaagattggtacacccct
gaaaaccggctcaaaccccactggaaaaagcgcgtcccccaagcagtttgggtacgcccg
gacggctccttttccgaggtgcctcaggcagaggcccagaagctgtggtggcagccccag
cccttttctctttgcctagcttgcggcgagtactacagtgggcgggagcgggagttcgcc
aagctggcttccctctccagcgaaggccgctccagcgccaccaccattctggccacttct
ctgctgcgccatgccgctcagacgggtgcagcccgcggcaagctgctcacctttaccgac
aaccgccaggacgcctccctgcaggccggccacttcaacgattttgtgcatgtggccctt
ctgcgggcctcgctctatgctgccctgcaggagaaaaaagagctggacttctcagaggta
gccccggcagtggtgcaggcctcaggcttgagccttgccgacattacccaaaaccccgat
ttggatcccgactcgcccagtgccgaggaagtgtggcagacctttagcgagctaaccgaa
taccggctctatgaagatctgcggcgcggctggcgggttacccaccccaacctggaacag
gtgggcttgttgaaaatcgaataccgcagcctcagggagctttgccaaggctcggccctg
gcccctctccacccctggtttgtccaggccgaggttgaggagcgggaacgcctgctgcgg
gctgttttggatcagtttcggcgcaaattggccatcgatgtgcgcctgctcaaagccgag
tcccagagaacgctgcgccgacgggccgagcaacacctcaacgagttttggggcctagaa
gagtacgacgagctgcggacggccacctgctttgtccgccaaagctgcgacggaaaggac
ataacaactttcagcctgggcccccgcagcgccctcggacgctttcttgccaagcgcctt
gggctaacccgggaaacctacgatgagcttttgggatccctgctttctctcctagttagc
tacgacctgctgcggcgccactcggagaatggccaggaagcctaccagctcaacgctggc
tgtctgcgctggtgcctgggcaatggctcgccgccgccagatcctctgtattcccgccgg
gccgagcagagcggctactcctctgcccgccgccccgttaatctctttttccagcgcctc
taccaggccggggcagcagggctgggatccctggaggctagggagcacactgcccaagtg
gttcggccaggagagcgggagcagcgagaaaggcgctttcgcggggaggatcaagctcga
cgccttccctatttggtgtgctcgccaaccctggagttgggggtcgatattgccgatttg
gatctggtgcatctgcgcaacgtgccccccacacccgccaactacgcccagcgcagcggt
cgggcaggccgccaggggcagccgggactcatcatcacctattgcggggctttcaatagc
cacgaccagtactacttccgccgccgccccgagatggtggccggtcgcgtgcgccctccc
cgcctggatctagccaacgaatcgctgctgcgcgctcacatccacgccgtttggttggct
caggtgcgcctgcccctaggcaattccattgaaaccgtcatcgacgcggatcgggaagag
ctgcccctcagggagacagtggcccagcaaatccaacttgaggagtctgcccgccaacaa
gtgaaggagcaggtgcagaagctgctggccgccgatcgccaactcctagataaaagcggc
tggtttagcgagcgctggcttcagcaggtcattgaagaggcaccccaggcttttgaccga
gctttcgatcgctggcgagagctctatcgggctgccacgcagcagttggaagccgctaac
cgccagctccagacgactcgccaaaagaaagaccaacaggaagccgagcgccgccagcaa
gaagccctgcgccagcgcaacttgctgctgcagattggaacccagcgggaggaaagcgac
ttctatccctaccgctatttggctagcgaaggcttcttgcccggctacaacttccctgcc
ttgccggtgcgggcctgggtgccccgcggcagcgagggcgagttcatcgcccggcctcgc
tttttggctatccgcgagtttgctccccacaacttcctctaccatgagggctgccagtgg
gaagcagtggcgtttcaggctccgcccggcggcctggaggagcgcaaaagtagccacaag
ctctgttttagctgtggggcctttgccgatccccacctggattgctgccccgtctgcggc
acccagttcgatgggcaaaacagcctctttacccagcttctggaaatgcccaatgtgcgc
atgcggcggcggaatcgcatcacagctgacgaagaggagcggcggcggcaaggctacgag
ctgcagaccttcttccagtttgctcccgaaagctctggctaccgcgtccaagaagctgat
gtgctgagcggacaaactcccctgctgcagttgcgctatgccccggcggccaccctgcta
cgcatcaaccacggctggcggggaagtggagggcgcggctttttggtcaactttgaaaat
ggggaagttccctcgcgagatcagcttgagcggaacagggcaggctcgtccaacccagtc
cccctgcagtccattcgcctggcggtgcgcagtacccaaaacctgttgctggtgcgccta
gttcagccaggggtggagaatccgcaggccctggagaccaccctgcgctatgccctcaag
cgagggatcgaagagacctttgagctagaagagacagagctggccgccgagtgcatcggc
cagggatcccatcaggccatgctcttctacgaaacagcagaagggggcgctggcgtcctg
cggcgcctggtggaagagccccaggctctagcggaagtggcccaagtggcgctggagatc
tgtcacttccagctttcagaggccgggatccaagacctgcggcccgaatgccgagcagcc
tgctacgaatgcctgctcagctatgccaaccaacgggaagcgctgcagcttgaccgctat
cagatccgggatcttttgggcctgctggtcaacagccgcaccgagctgcgctccctgggt
cgctcccgccaagagcacctggagtggctgcgccagctcctggaccctcgctctgaactg
gagcgccgctttctcgaaacgctggcagcaggagggtatcggctgcctgaggatgcccag
aaagccattgccgatcccgactgcgtcgttgacttcttctacagccccaacatctgcatc
ttctgcgatggcccagtccacgaccagcctgcccaagcggaacgggatcgccaactgcgc
tcgcagctgcagggacggggctaccgcgtgcttgttctgcgctacaaccaagatttgcaa
gagcagctggctcgctacccagaagtatttggcaagggcagctag
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