Gloeothece citriformis: PCC7424_4561
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Entry
PCC7424_4561 CDS
T00808
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cyc
Gloeothece citriformis
Brite
KEGG Orthology (KO) [BR:
cyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyc03400
]
PCC7424_4561
DNA repair and recombination proteins [BR:
cyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PCC7424_4561
Archaeal homologous recombinant proteins
PCC7424_4561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
Rad50_zn_hook
SbcC_Walker_B
AAA_21
AAA_29
AAA_15
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ACK72924
UniProt:
B7KAF0
LinkDB
All DBs
Position
5039606..5042629
Genome browser
AA seq
1007 aa
AA seq
DB search
MIPLHLTLKNFLSYQEASLDFRGLHTACVCGANGAGKSSLLEAITWAIWGESRAASEDDV
IHTGAENVRVDFEFICNSQCYRIIRTRQRGKGGSLDFQIASSSGFKTINGKGLRGTQEAI
ISSLKLDYDTFINSAYLRQGRADEFMQRRPNERKQILADLLKLDQYEQLADRAKDLSKLY
KGQLQQLEESKKRLTEKLEEKEVIVTQKFTIEQEIEQGQKEQDRDRERLQQLQTLQHQRQ
NWQQQLIWHQNQYKNGVQESDRLKIEQAEINHKLEELQTLLAQEENINFNYQNFLKLQQE
EEILSNKFKTYQQFQNQKQQLEQQILKQTNALKLELQKTKTRLENIQQQEQEIQHILRNT
AEVEAGLEKLQESRQRLNELDQLQHQVAPLLQRQNHLKAEIQTTQARLMAKLEQLQEEEI
KLSRELDQVPATRQEAMTVDTQIQDLEKKQIYQVRVKEKGTERKTRKKQLEDSQIGFEKQ
LKELAQKLDLLEIPEATCPLCEQELDDHHRHHVIAKTQTQQREIQNQIWQIKEHIVICER
ELQNLRSEYAQLKEELTPYPSLQQYYGQLEAKLEASGELKVKLNQLRSEISELEEALAQN
YYEPQLQNELKSLEKDLEKLQYDEQTHALVRAEEKRWRWAEIKQAKLDEANRRQSKINQE
KPQILEKITSLETELENLTKTSTLQQHLEAVEQNLVELGYDPDEHQQLRLSLRQEQNWQL
RHQQLQQAKQQYPNLKEKLNRVEQQLKIQQENQGTIQQQIEQIANQIENLTDYQDVIQDL
EQIIQERRQNLDQLLSKKGSFEQSLNQIESLQQEYQINRQQVKDYKKKCRVYKELAQAFG
KNGIQALMIENILPQLEAETNQILTRLTGNQLHVQFLTQKSGKNSRQKANAKLIDTLDIL
IADARGTRAYETYSGGEAFRINFSIRLALAKLLAQRSGTSLQMLIVDEGFGTQDSEGCER
LIAAINAIASEFACILTVTHMPQFKEAFQHRIEVRKTSQGSQLILSS
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgattcccttacacttaaccttaaaaaactttctcagttatcaagaggcttcattagat
tttcgaggactccatacggcttgtgtatgtggagctaatggggctggaaaatcttccctt
ttagaagccattacttgggcaatttggggggaaagtcgggcagcgagtgaagatgatgtt
attcataccggcgctgaaaatgtacgggttgattttgaatttatttgtaatagtcaatgt
tatcgaattattcgcactcgtcaaagaggaaagggaggctcattagattttcaaattgcc
agtagtagcgggtttaaaactataaatgggaaaggattaagagggactcaagaggctata
atttcctctttaaaattggattatgatacttttattaattctgcttatttacgtcaaggt
agggcagatgaatttatgcagcgtcgtcctaatgaacggaaacaaattttagcagattta
ttaaaattagaccaatatgaacaattagccgatcgagccaaagatctctcaaaactctat
aaaggacaactgcaacaattagaagaaagtaaaaagcgtttaacagaaaaactggaagaa
aaagaagtgatcgttactcaaaaattcacgatagaacaagagatagaacaaggacaaaaa
gagcaagatcgagatcgagaaagactacaacaattgcaaactctccaacatcaacggcaa
aattggcagcaacaattaatctggcatcaaaatcaatataagaatggagttcaagaaagc
gatcggctaaaaatagaacaggctgaaattaatcataaactggaagaattacaaactctg
ctcgctcaagaagaaaatattaacttcaactatcaaaattttcttaaattacagcaagaa
gaagaaatattatctaacaaatttaaaacttatcaacaatttcaaaaccaaaaacaacaa
ctagaacaacaaatattaaaacaaaccaacgctttaaaattagaacttcaaaaaactaaa
actcgtttagaaaatattcaacaacaagaacaagaaatacaacacatcttaaggaatacc
gcagaagtagaagccggtttagaaaaattacaagaaagtcgtcaacgtctgaatgaatta
gatcaactgcaacatcaagtcgcgcctcttttacaaagacaaaatcatttaaaagccgag
attcaaacaacacaagctcgtttaatggcaaaattagaacaactacaagaagaagagatt
aaattatctagggaactggatcaagttccggccactcgacaagaagctatgactgttgat
actcaaattcaagatttagaaaaaaagcaaatttatcaagtccgagttaaagaaaaagga
acagaaagaaagactcgaaaaaaacaattagaagactctcaaattggttttgaaaagcaa
ttaaaagaattagctcaaaaactggatttattagaaattcctgaagcaacttgtccatta
tgtgaacaggaattagacgatcatcatcgtcatcatgtgatagctaaaactcaaactcaa
cagagagaaatacaaaaccaaatttggcaaattaaagaacatatcgtcatttgtgaacgg
gaactacaaaacttaagaagtgaatacgctcagttgaaagaagaattaaccccttatcct
tctttacaacagtattatgggcaactagaagccaaattagaagccagtggagaacttaaa
gttaagttaaatcaactgcgctcagaaatcagtgaacttgaagaagctttagcccagaat
tattatgagcctcagcttcaaaatgagttaaaatctcttgaaaaagacttagaaaaactt
cagtatgatgaacaaactcatgctttagtgagggcagaagaaaaacgttggcgctgggca
gaaattaaacaagcgaaactcgatgaagctaaccgtcgtcagtctaaaattaatcaagaa
aaacctcaaattttagaaaaaattacctctctagaaacagagctagaaaacttaactaaa
acctcaacacttcagcaacatttagaagcagtagaacagaatttagtcgagttagggtat
gatccagatgagcatcaacagttacgattatctttacgtcaagaacagaattggcaattg
cgtcatcaacaattacaacaggcaaaacaacaatatcctaacttaaaagaaaaacttaat
cgagttgagcaacagttaaaaatacaacaggaaaatcaaggcactattcaacagcaaatt
gaacaaattgctaatcaaatcgaaaatctgactgattatcaggacgtgattcaagactta
gagcaaattattcaagaaagaaggcaaaacctcgatcaattattatctaaaaaaggaagt
tttgaacaatctttaaaccaaatagagtctttacaacaagaatatcaaatcaatcgacaa
caggtcaaagactataagaaaaaatgtagagtttataaagagttagctcaagcgtttgga
aaaaatggcatacaagctctgatgattgaaaatattttacctcaattagaagcggaaacg
aatcaaattttaactcggttgaccgggaatcaattgcacgttcaatttttaacccaaaaa
tcgggaaaaaatagccgtcaaaaagctaacgctaaattaattgataccctagatatttta
attgctgatgctaggggaacaagagcttatgaaacttattccggcggggaagcgtttagg
attaatttttccattcggttagctttagccaaattattagctcaaagatccggcacgtca
ttacaaatgttaattgttgatgaaggctttgggactcaagatagtgaaggatgcgagcgt
ttaattgcagctattaatgcgattgcgtctgagtttgcttgtattttaacggttacccat
atgcctcaatttaaagaagcttttcaacatcgaatcgaagttcgtaaaaccagtcaagga
tctcaactgattttgtcaagttaa
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