Rippkaea orientalis PCC 8802: Cyan8802_0129
Help
Entry
Cyan8802_0129 CDS
T00968
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cyh
Rippkaea orientalis PCC 8802
Pathway
cyh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cyh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cyan8802_0129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyh03400
]
Cyan8802_0129
Enzymes [BR:
cyh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Cyan8802_0129
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Cyan8802_0129
DNA repair and recombination proteins [BR:
cyh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Cyan8802_0129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
zinc-ribbons_6
Motif
Other DBs
NCBI-ProteinID:
ACU99099
LinkDB
All DBs
Position
133391..134239
Genome browser
AA seq
282 aa
AA seq
DB search
MPELPEVETVRRGLNQFTSGKIIEDAEILLTRSLAYPTSVDEFLSSIRGVSFGEWQRRGK
YLLGTLVKGSGEAAGWLGVHLRMTGQLLWVNQSEPLQTHTRLRLFCGENQELRFVDIRTF
GKVWWVPPKETPQRVITGLKKLGVEPFSDEFSVDYFTTKLKGRQRNIKTLLLDQEIVAGL
GNIYADEVLFKSGVHPTTLGKNLKPQQIEQLRIAIIEVLETAIVHGGTTFSDFKGVTGIN
GNYGGTAWVYGRTGEPCRVCGTSIERLKLGGRSAHFCPRCQA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
gtgccagaactccctgaagtagaaacagtgcgtcgaggtcttaatcagttcacttcaggt
aaaatcatcgaagacgcagaaattttattaactcgtagtcttgcttatcctacttcggtt
gatgaatttttaagcagtattcggggtgttagttttggtgagtggcaacggcgaggtaaa
tatttattaggaacactggtaaaagggtctggagaagccgcaggatggttaggggttcat
ttacgaatgacgggtcaattattatgggtaaatcaatctgaaccgctacaaacccatacc
cggttgcgtttgttttgtggtgagaatcaagagttacggtttgtggatatacgcaccttt
ggtaaggtctggtgggttcctccgaaggaaaccccacaaagggttattacagggttaaaa
aaattgggggttgagcctttttctgatgaattttccgttgattattttaccacaaaatta
aaaggtcgtcaacgcaatattaaaaccttgttacttgatcaggaaattgtggccgggtta
ggcaatatttacgccgatgaagtattatttaaaagcggtgttcatccgacgactttagga
aagaatttaaaacctcaacaaattgaacagttacgaatagcgattattgaagtattagaa
acagctattgttcacggaggaacaacctttagtgattttaaaggagtaacgggaattaat
ggtaattatgggggaactgcttgggtttacggtcgcacgggagaaccttgtcgggtttgt
ggtacgtctattgaacgcttaaaattagggggacgttcggctcatttttgtccccgatgt
caagcttaa
DBGET
integrated database retrieval system
