Rippkaea orientalis PCC 8802: Cyan8802_0632
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Entry
Cyan8802_0632 CDS
T00968
Name
(GenBank) DNA-directed RNA polymerase, gamma subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cyh
Rippkaea orientalis PCC 8802
Pathway
cyh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cyh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Cyan8802_0632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cyh03021
]
Cyan8802_0632
03400 DNA repair and recombination proteins [BR:
cyh03400
]
Cyan8802_0632
Enzymes [BR:
cyh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Cyan8802_0632
Transcription machinery [BR:
cyh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Cyan8802_0632
DNA repair and recombination proteins [BR:
cyh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Cyan8802_0632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
ACU99576
LinkDB
All DBs
Position
complement(642304..644181)
Genome browser
AA seq
625 aa
AA seq
DB search
MKAQADSRFDYVKINLASPERIRQWGERSLPNGVVVGEVTKPETINYRTLKPEMDGLFCE
RIFGPSKDWECWCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGFIKLAAPVTHVWYLKG
IPSYLSILLDMALRDVEQIVYFNSYVVLDPGNASNLSYKQLLTEDQWIEIEEQIYAEDSE
LYGIEVGIGAEAIQRLLQEINLEEVAEKLREEILESKGQKRAKLIKRLRVIDNFVATNSR
PDWMVLSVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLSRLQEILAPEIIVR
NEKRMLQEAVDALIDNGRRGRTVVGANNRALKSLSDIIEGKQGRFRQNLLGKRVDYSGRS
VIVVGPKLKIYQCGLPREMAIELFQPFVIHRLIRLGLVNNIKAAKKLIMREDPSVWTVLE
EVITGHPVLLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLS
LEAQSEARLLMLACHNILSPATGKPIVAPSQDMVLGCYYLTAENPKAQKGANRYFGSIPD
AIKAYEQGTVDLHAYVWLRYNGDVVTHKPDTEVLKTETLDDGSVIKHYRERRVREKDGEV
ISQFIRTTPGRIIYNKTIEDALVAL
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcacaagcagattcacggtttgactacgttaaaatcaatttagcctcgcctgaa
cggattcgtcaatggggagaaagaagccttcccaacggtgtcgttgtcggagaagtcacc
aaaccggaaaccattaactatcgaaccctcaaacccgaaatggatgggctcttctgtgag
cgcatttttggaccttcaaaagattgggaatgctggtgcggtaaatacaaacgggtacgt
catcgggggatcgtttgtgaacgctgtggagtagaagtcaccgagtcccgcgtccgtcgt
caccgcatgggattcattaaattagctgctcccgttacccatgtttggtatcttaagggg
attcccagttatctgagcatccttttagatatggccttgcgggatgtagaacagattgtt
tacttcaactcctacgttgtacttgacccaggcaatgccagcaatttatcctataaacaa
ctcctcaccgaagatcaatggattgaaatcgaggagcaaatctacgcagaagattcggaa
ctctacggaattgaggtcggaattggtgcagaagccattcaaagactgctacaagaaatt
aatttagaagaagtcgccgaaaaactgcgcgaagaaatcctcgaaagcaaaggacaaaaa
cgcgctaaactcatcaaacgcttacgggtgattgataactttgttgcgactaattcccga
cctgattggatggttttgtcggtaattccggtaattcctcccgatttacgtcccatggtg
caattagatggaggtcggtttgcaacctctgaccttaatgacttgtatcgtcgggtcatc
aaccgcaataaccgtctgtcccgtcttcaggaaattctcgcaccagaaatcatcgtccgt
aacgaaaaacggatgttacaagaagccgtagacgctttgattgataacggacggcgtgga
cggacagtggtaggagccaataatcgagccctgaagtccctttcggatattatcgaagga
aaacaaggtcgtttccgtcaaaacctcttaggaaagcgggtagactactctggacgttct
gttattgtcgtcggtcccaagctgaagatttatcagtgtggtctaccaagggagatggct
attgaattattccaaccctttgttattcatcgtctgattcggttagggttggtcaataac
atcaaagcagccaaaaagctgattatgcgggaagaccctagcgtttggacggttttagaa
gaagtgatcacaggacaccctgttttactcaaccgggctccaaccttacaccgtttaggg
attcaagcctttgaacctatcttagtcgaaggtcgagctattcagctacacccattggtt
tgtccggcctttaacgcggactttgatggggaccaaatggcggttcacgttcctctttcc
ttggaagcacagtcagaagcacggttattaatgttagcttgccataatatcctctctcca
gcaacgggtaaaccaattgttgcaccttctcaggatatggttttaggctgttattatctc
accgcagaaaatcccaaagcgcaaaagggtgctaatcgttattttggcagtattcctgat
gctatcaaagcctacgaacaaggaacggtggatttacacgcttatgtttggttgcgctat
aacggggacgttgttacccataaacccgatacggaggtgctgaaaacggaaaccctcgac
gatggtagcgtgattaagcattaccgtgagcgtcgagttcgggaaaaggatggcgaggtg
atttctcagtttatccgtactactccagggcgcattatttacaataagaccattgaagat
gcgttagtggctctttag
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