Rippkaea orientalis PCC 8802: Cyan8802_3614
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Entry
Cyan8802_3614 CDS
T00968
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cyh
Rippkaea orientalis PCC 8802
Pathway
cyh03410
Base excision repair
cyh03430
Mismatch repair
cyh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cyh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cyan8802_3614
03430 Mismatch repair
Cyan8802_3614
03440 Homologous recombination
Cyan8802_3614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyh03400
]
Cyan8802_3614
DNA repair and recombination proteins [BR:
cyh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Cyan8802_3614
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Cyan8802_3614
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Cyan8802_3614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
HTH_PafC
Motif
Other DBs
NCBI-ProteinID:
ACV02431
LinkDB
All DBs
Position
3685264..3687594
Genome browser
AA seq
776 aa
AA seq
DB search
MNPLQPQWQILPSLSVPLWFREIVKRYTPDSTGEYAAQLLWQRGIQDKDELLGFLDANAY
HPSSPFAFGQEMKRAVERLKKAYETKEKVTIWGDFDADGITATSVLWEGLGQFFIPHLQL
NYYIPNRLTESHGLNCQGIDQLATAGTQLIVTCDTGSTNLAEIDYANRLGLDIIITDHHT
LPDDRPPVIAIINPRYFSNNYPLFNLSGVAVAYKLVQAFYETYPEIPQQPLENLLDLVAI
GLIADLVELRGDCRYLAQKGIEQLQKQRQFPTRPGIAKLLEYCKRSGDRPTDISYGIGPR
INAISRIHGDATFAVELLTSRDQERCQQLALETELANTRRKALQQTVIKDVKKKLDQLDL
STTGVIVLDDPQWPNGVLGLVAGQIAQEYGRPTILLTTAETEKLGENGVKLARGSARSVN
QIDLYELVSSQKYLLYRFGGHPFAAGLSLPLENLSIFKESINQKLRQTVHDISLLKTTIE
ADLVVTVADLGQFLFRELKLLEPCGMGNRVPKLLIQNCWFDNIINYNSKDLRGDKIQYIR
TKFEMYDEYSNQGFPGVWWGHYKEDLPQNKPQDAIVELDYNSYSKRYEVRLIAIRDTVFN
LETNQQNQQGMSLLDCRNQQILETINPDYNVLKSCPKTWNELHQIYRKSQQQETKLVLAY
SSPENLNSQQVWQQLVGIAKYVSRTQESVTKQQLTEKLDISDRSLNLGLETLSHVGFTLS
HKQDQLQFQWLGEVSNDVQQKINQFLEAIEEEQFQRQYFYQIPITILKERLTKSLN
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctctgcaacctcaatggcaaattctcccttctctatcggttcccctgtggttt
cgggaaatcgttaaacgctacactcctgactctacgggagaatatgcagcacaattatta
tggcaacggggtattcaagacaaagatgaactccttgggtttcttgatgctaatgcttat
catcctagcagtccttttgcctttggacaagagatgaaaagggcagttgaacgacttaaa
aaagcctatgaaaccaaagaaaaagtaacgatttggggagactttgatgcagatggaatt
acggcaactagcgttctttgggaaggactgggacaattttttatcccccatctgcaactt
aattattatattcccaatcgtctgacagaatcccatgggttaaattgccaaggaattgat
caattagcaacagcaggaacccaattaatcgttacttgtgatacaggaagtactaactta
gctgaaattgactatgctaatcggttaggacttgatattattattactgatcatcatacg
ttacctgatgatcgtcccccggttattgctattattaatcctcgctatttttctaataat
tatcccctgtttaatttatcaggagtagcggtagcttacaagttagtgcaagcgttctat
gagacttatccagaaattccgcaacaacccctagaaaatttattagatttagtcgctatt
gggttaattgcagatttagtcgaattgcgcggggactgtcgttatttagcgcaaaaaggg
attgaacaattgcaaaaacaacgacaatttcctacccgtccagggattgctaaattatta
gaatattgtaaaagaagtggtgatcgtcctacggatatttcctatggtattggtccgaga
attaacgcgattagtcgcattcatggagatgctacctttgccgtggaattactcaccagt
cgggatcaagaacgttgtcaacagttagctttagagacagaattagctaataccagacgc
aaagcattacagcaaacggtgattaaagatgttaagaaaaaactcgatcaacttgactta
tcaaccacgggagttattgttttagacgatcctcaatggccgaatggtgtattaggatta
gtagcaggacaaattgctcaagaatatggtcgtcctacgattttattaacaacagcagaa
acagaaaagttaggcgaaaacggtgtaaaattagcaagaggatcagcgcgttccgtcaat
caaattgatttgtatgaattagtgtcctctcaaaaatatttgctctatcgttttggagga
catccctttgcagcagggttaagtttaccgcttgaaaacctctcaattttcaaggaaagt
attaaccaaaaattacgtcaaacggttcatgatattagtttattaaaaacaactattgaa
gcagatttagtagtaacagttgctgatttagggcaatttctttttagagaactgaaactc
ttagaaccttgtgggatgggaaatcgagttcctaagcttttaattcaaaactgttggttt
gacaacattatcaattataattctaaagatttgcgaggtgataaaatacaatatattaga
actaaatttgaaatgtatgacgagtatagtaatcaaggttttcctggggtttggtggggt
cattataaagaagatttgccccaaaataaaccgcaagatgctattgtcgaattagattat
aattcctacagtaaacgttatgaagttcgcttaattgctattagagataccgtttttaat
cttgaaactaatcaacaaaatcaacaaggaatgtctttgttagactgtcgaaatcaacag
attttagaaacaattaaccctgattataacgtcttaaaaagttgtcccaaaacttggaat
gaattacatcaaatttatcgaaaaagccagcaacaagaaactaaacttgtccttgcctat
tcttctccagaaaacctaaattctcaacaggtttggcaacaattagtcggaatagctaaa
tatgttagtcgtacccaagaaagcgttactaaacaacagttaacggaaaaactagatatt
agcgatcgcagtcttaatttaggtttagaaaccttatctcatgtagggtttactttatcc
cataaacaagatcaattacaatttcaatggttaggagaagtcagcaatgatgtccaacaa
aaaattaatcaattccttgaagcgattgaggaagaacaatttcagcgtcaatatttttat
caaattcctattactatccttaaagaaagattgacaaaaagtttaaactaa
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