Citrobacter youngae: CD187_14330
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Entry
CD187_14330 CDS
T05526
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cyo
Citrobacter youngae
Pathway
cyo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cyo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CD187_14330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cyo03021
]
CD187_14330
Transcription machinery [BR:
cyo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CD187_14330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_24
HTH_23
HTH_28
GerE
HTH_11
HTH_3
PCI
HTH_7
PP1_inhibitor
NatB_MDM20
HTH_40
HTH_36
TnsD
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AWV27325
LinkDB
All DBs
Position
2909087..2909608
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AA seq
173 aa
AA seq
DB search
MSDHATTTASFTLESLYGAHHGWLKSWLTRKLQSAFDADDIAQDTFLRVMGSDSLSTIRD
PRSFLCTLAKRVMVDLFRRNALEKAYLEMLALMPEALAPSPEERESQLETLQLIDSMLDG
LNGKTREAFLLSQLDGLTYSEIALKLGISVSSVKKYMAKAIEHCLLFRLEHGL
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccacgccactaccactgcttcctttacgctcgagtcgctttatggcgcacat
cacggctggttgaaaagctggctgacgcgcaaactccagtccgcctttgatgcagatgac
attgcccaggacacttttctacgggtaatgggcagcgactcgctctcgacgatccgcgat
ccgcgctcctttctgtgcactctcgccaaacgggtgatggtcgacctgtttcgccgaaac
gcgctggaaaaagcctatctggagatgttggcgcttatgccggaggcgctcgcgccttcc
cccgaggaacgcgagagccagctcgaaaccctgcaactcatcgacagcatgcttgacggg
ctgaacggaaaaacacgagaagcgtttctgctatcgcaactggatggtctgacatacagc
gagatcgcgctgaagctcggtatctccgtcagttcggtgaaaaagtatatggcaaaggct
atcgaacattgtctgctgtttcgtctggagcacggtctgtga
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