Corynebacterium yudongzhengii: C3B44_07030
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Entry
C3B44_07030 CDS
T07188
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cyz
Corynebacterium yudongzhengii
Pathway
cyz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cyz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C3B44_07030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cyz03019
]
C3B44_07030
03009 Ribosome biogenesis [BR:
cyz03009
]
C3B44_07030
Enzymes [BR:
cyz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C3B44_07030
Messenger RNA biogenesis [BR:
cyz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C3B44_07030
Ribosome biogenesis [BR:
cyz03009
]
Prokaryotic type
rRNA helicases
C3B44_07030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AWB82143
LinkDB
All DBs
Position
complement(1514843..1516855)
Genome browser
AA seq
670 aa
AA seq
DB search
MSITDENASGGVNEPDNYTTSESQDNSQGDAAQAANDTRDANASESTGSAQAENADADND
NQGANAESSADEAAAEDNATTNGFAGLGLSDKVLDAVKRVGFENPSPIQEQTIPLLMEGR
DVVGLAQTGTGKTAAFALPVLSQIDIDDRSPQALVLAPTRELALQVADSFQSFADHLGGV
EILPIYGGQAYGIQLSGLRRGAQVIVGTPGRVIDHLERGSLDISNLSFLVLDEADEMLNM
GFQEDVERILEDTPDDKQVALFSATMPTGIRRISGQYLDDPVEVTVKSQTRTATNIEQRY
LMTAHRNKLDAITRILEVTDFDAMIVFVRTKQETEELADKLRDAGFSSAAINGDINQAQR
ERTVDQLKDGRLDILVATDVAARGLDVERISHVLNYDIPKDTESYVHRIGRTGRAGRSGE
AILFVTPRERRMLRSIERATKAELEEMDLPTVDEVNESRKKKFADKITESLESDQVEIFR
SLVRDYAEQNDVPMEDIAAALAAQAQAGDEFLMKEPPPEKRRGREREDRGRGGKGPRRDD
GDFDLYRLAVGKRHHVRPGAIVGALANEGGLSSRDFGRITITHENSLVELPKNLDPSFFD
RLRDTRIAGELINIERDYGRPPRKGGPRGGRGGGGRGGDRRGGGGRGGHRKGGDRGRGGR
GGDRGRGGRR
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaccgatgaaaacgcctccggcggcgtcaacgagccggataactacactacg
tcggaatctcaggacaactcgcagggtgacgcagctcaggctgccaacgacaccagggat
gcgaacgcttctgagtccaccggctccgcacaggcagaaaacgccgacgcggacaacgac
aaccagggcgccaacgcagaatcctcggccgacgaggccgctgccgaagacaacgccacc
accaacggatttgctggactcggcctttcggacaaggtccttgacgccgtgaagcgcgtg
ggctttgaaaacccttcgcccatccaggaacagaccatcccgctgctgatggaaggccgc
gacgtcgtcggcctcgcccagacgggtaccggcaagacggccgcgttcgcgctgccggtc
ttgtcgcagattgatatcgacgaccgcagcccccaagccctcgtcctcgcgccgacccgc
gaactcgccttgcaggtcgccgattccttccagtccttcgcggaccacctcggcggggtc
gagatcctgccgatctacggcggccaggcctacggcatccagctgtctggtctgcgtcgg
ggcgcgcaggtgatcgtcggcacgccggggcgcgtcatcgaccacttggagcgtggctcg
ctcgacatttcgaatctgagcttcctcgtgctcgatgaggccgacgagatgctcaacatg
ggcttccaggaggatgtcgagcgcatcctcgaagacaccccggacgacaagcaggtcgct
ctgttctcggccaccatgccgacgggcatccggcgcatctcgggtcagtacctcgacgac
cccgtcgaggtcaccgtcaagtcccagacgcgcaccgccaccaacatcgagcagcgctac
ctcatgacggcgcaccgcaacaagctcgacgcgatcacccgcatcctcgaggtcacggac
ttcgacgccatgatcgtcttcgtgcgcaccaagcaggagaccgaggaactcgcggacaag
ctgcgcgacgccggcttctcgtctgccgccatcaacggcgacatcaaccaggcgcagcgc
gaacgcaccgtcgatcagctcaaggacggccgcctcgacatcctcgtggcgacggacgtg
gccgcccgcggcctcgacgtcgagcgcatctcgcacgtgctcaactacgacatcccgaag
gataccgagtcctacgtccaccgcatcggccgtaccggccgcgccgggcgtagcggcgag
gcgattttgtttgtcactccgcgcgagcgccgcatgctgcgctcgatcgaacgcgccacc
aaggccgagctcgaggagatggaccttcccacggtcgacgaggtcaacgagtcccgcaag
aagaagttcgccgacaagatcacggagtccctcgagtctgaccaggtcgagatcttccgc
agtctcgtgcgcgactacgccgagcagaacgacgttcctatggaggacatcgccgccgcc
ctcgccgctcaggcgcaggcaggcgacgagttcctcatgaaggaaccgccgccggagaag
cgccgcggccgcgagcgcgaggatcgcgggcggggcggcaagggcccgcggcgtgacgac
ggcgatttcgacctctaccgtctggccgtcggtaagcgtcaccacgtgcgcccaggagcc
atcgtcggcgcgttggccaacgagggtggcctaagctcccgcgacttcgggcgcatcacc
atcacgcacgagaactcgctggtcgagctcccgaagaacctcgacccctcgttcttcgat
cgcctgcgcgatacccgtatcgccggcgagctcatcaacatcgagcgtgactacggacgt
ccgccccgcaagggcggaccgcgtggcggacgcggtggcggtggccgtggtggcgatcga
cgcggcggcggtggacgtggtggtcaccgtaagggtggcgaccgcgggcgtggtggccgc
ggtggagatcgcggtcgcggaggccggcgctag
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