Desulfosporosinus acidiphilus: Desaci_0482
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Entry
Desaci_0482 CDS
T02148
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
dai
Desulfosporosinus acidiphilus
Pathway
dai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Desaci_0482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dai03021
]
Desaci_0482
03400 DNA repair and recombination proteins [BR:
dai03400
]
Desaci_0482
Enzymes [BR:
dai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Desaci_0482
Transcription machinery [BR:
dai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Desaci_0482
DNA repair and recombination proteins [BR:
dai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Desaci_0482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AFM39548
UniProt:
I4D174
LinkDB
All DBs
Position
488160..491534
Genome browser
AA seq
1124 aa
AA seq
DB search
MFYPVKVGVRERWSYSRIREVLDMPNLIEIQQNSYRWFLDEGLRDMFRDISPIQDFTGNL
VLEFIDYSLGEPKYQVEECKERDVTFAAPLRVKVRLINKETGEVKEQEVFMGDFPLMTDK
GTFIINGAERVIVSQLVRSPGVYYAEQIDPSGKKLYGATVIPNRGAWLEFESDINDNIFV
RVDRTRKLPGTVLIRALGYSSNGQILELFNDNEYIRATLERDNSESTEEALVEIYKRLRP
GEPPTVDSARSLLEALFFDAKRYDLAKVGRYKLNKKLGLDIPMEVRHLTRGDIVASIQRM
LDLMDGEGYKDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMTIQDVEVITPQVL
INIRPVVAAIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLSRERAGFEVRDVHH
SHYGRMCPVETPEGPNIGLIGSLSTFGRINPYGFIEAPYRKVDKENGRVLDEIHYLTADE
EEKYVVAQANAPLDEDGNFLLDKIDGRHGPDFVHVSPNQVDYMDVSPKQMVSIATALIPF
LEHDDANRALMGSNMQRQAVPLLRTDSPYVGTGMEYKTAKDSGVCAITKQAGVVQRATAD
DIVVLHDDGTTERHKLLKYLRSNQGTCINQRPIVKKGDKVEANQIIADGPSTDHGELALG
RNVLVAFMTWEGYNYEDAILINEKLVREDYYTSIHIEEYESDARDTKLGPEEITRDIPNV
GEDVLKDLDERGIIRIGAEVRPGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTS
LRVPHGEAGKIVDVKVFTRENGDELSPGVNQLVRVYIAQKRKISVGDKVAGRHGNKGVIS
RIMRQEDMPFMPDGTPIEVVLNPLGVPSRMNIGQVLETHLGWAAKALGLRIATPVFDGAR
EEDIFETLEKAGLPKDGKTMLYDGRTGVPFDSKITVGYMYVLKLHHLVDDKIHARSTGPY
SLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYTLQEILTVKSDDVVGRVKTYEAIVKG
ENIPEPGIPESFKVLIKEMQSLGLDVRVLSSDDQEIEIHDTDEDIAETAKELGIDLHEEI
APTGPRLVETEDEDEEEAVDEEDPLDDLNEEVLEEEDLDLDDLK
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgttctatcctgttaaggtaggggttcgggagcgctggagttattccagaatccgtgaa
gtccttgacatgccaaatctaattgaaatccagcagaactcctatcgttggtttcttgat
gaggggctgcgcgatatgtttcgcgatatctctcccattcaagactttaccggcaatctc
gttttagaatttatcgattacagcttaggagaaccaaagtaccaggttgaggagtgtaaa
gaacgcgatgtgacttttgccgctccactgcgggtaaaagtacgccttatcaacaaagaa
accggtgaagttaaagaacaagaagtctttatgggtgattttcctctgatgacagacaag
ggtacctttattatcaacggtgctgaacgtgtcattgtcagtcagcttgttcgttcgcct
ggcgtatactatgcggaacagattgatccgagtggtaagaaactttatggggctacggtg
ataccaaaccgtggagcctggctagaatttgaatcggatattaatgataatatttttgtg
agggttgaccggactcgcaaactgcccggaaccgtgctgattcgggctttggggtattcc
agcaacggtcagattttagaactgtttaatgacaatgaatatattcgtgcgaccctggaa
agagacaactctgagtctacggaagaagctttggttgaaatctataagcgattgagaccg
ggagaacctcctactgtggatagtgcccgatctctgctggaagctctcttttttgatgcc
aagcggtatgatctggcgaaggttggccgttataagctcaataagaaattaggcctggat
atacccatggaagtccgtcatctgactcgcggggatatcgtggcgagcattcagcgcatg
cttgacctcatggatggggaagggtataaagacgacattgaccatttaggaaatcgtcgt
ttgcgttccgtgggagaattgctccagaatcaatttcgcatcggcttatccagaatggaa
cgcgtcgttcgtgaacggatgactattcaggatgttgaagtcattacgcctcaggtttta
ataaacattcgtcctgttgtggcagccatcaaggagttttttggcagcagccaattgtca
cagttcatggatcagaccaatcctctggcagagttgacgcataaacggcgtttaagcgct
ttgggacctgggggattaagccgtgaacgggcagggtttgaggttcgtgacgttcaccac
tcccactatggtcgtatgtgtcctgtagagactcctgaagggccgaacatcggcttaatt
ggctcattaagtacttttgggcgtattaatccttatggatttattgaagcgccctatcgc
aaagtggataaagagaacggccgtgttctcgatgaaatccattatctaacggctgatgaa
gaggaaaaatacgttgttgcccaggcgaatgcacctcttgatgaagacggaaacttcctt
ttagataaaatcgatgggcggcatggccctgatttcgtgcatgtatcgccaaatcaagtg
gactatatggacgtatcgccaaaacaaatggtctcgatagccacggcactgattcccttc
ttggagcatgatgacgcaaaccgtgcacttatgggttcaaacatgcagcgtcaagcagtt
ccgctattacgtacggattctccgtatgtgggaacgggcatggagtacaaaacggctaaa
gattcaggagtttgtgctatcacaaaacaagcaggggttgtgcagcgggcaactgcggat
gacattgtagttctccacgacgacggaactacggaacgtcacaagctgctcaaatatctg
cgctctaaccaaggaacttgtattaatcagcgccctattgtcaagaagggtgataaagtc
gaggctaatcagattattgctgacgggccatctaccgaccacggcgaacttgctttggga
cgaaatgtcttagtagccttcatgacttgggaaggttataactatgaagatgctattctg
attaatgaaaagcttgtgcgggaagattattatacatccattcatattgaggaatatgaa
tccgatgctcgggatacgaaacttggaccggaagaaatcactcgagatattcccaatgtc
ggagaagatgtcctgaaggatctcgatgagcgcggtattatccgcatcggggcagaagtt
cgccctggggatatcctggttggtaaagtaaccccgaaaggggaaacggaactgacggca
gaagaacgattgctgcgcgcaattttcggcgagaaggcccgtgaggttcgggatacttct
ttgcgggttccccatggagaagcagggaagatcgttgatgtcaaagtctttacccgggaa
aacggagatgagctgtcaccgggtgttaatcaacttgttcgggtgtatattgctcagaaa
cgtaagatttccgtgggtgataaggttgcaggacggcacggaaacaaaggggttatttcc
cgaattatgcgtcaggaggatatgcccttcatgccggatggtacaccaatcgaggtagtt
ttgaatcctctgggtgttccttcacggatgaatatcgggcaagttctggaaacacatttg
ggctgggctgctaaagctctgggtctgcgcattgctactcctgtttttgacggtgcacgt
gaggaagatattttcgaaaccttggaaaaggccggacttcctaaagacggcaagacgatg
ctctatgacgggcgtacgggagttccttttgacagtaagattacagtgggctatatgtat
gtgctgaagctccaccatttggttgacgacaaaatccatgctcgttccaccggaccgtat
tccttagtaactcaacaacccttaggtggaaaggcacagttcggcgggcagcgttttgga
gagatggaagtttgggccctggaagcctatggagcatcctatactctccaagaaatcctg
actgtcaaatcagacgatgttgtcgggcgtgttaagacttatgaagctattgttaaaggt
gagaatatccctgaaccgggaattcctgaatcctttaaagtattaattaaagaaatgcag
agtttaggattagatgtacgagttctttcctctgatgatcaggaaattgagattcatgat
acggatgaggatatcgcggaaacggctaaagaacttggtattgatctgcatgaggaaatt
gcgccgaccggcccccgtctcgttgaaaccgaagatgaggatgaagaagaagccgtggat
gaagaagaccctcttgatgatctgaatgaagaagtccttgaagaagaggatttggatctt
gacgatctcaaatag
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