Diachasma alloeum: 107036984
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Entry
107036984 CDS
T07663
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
dam
Diachasma alloeum
Pathway
dam03022
Basal transcription factors
dam03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107036984
09124 Replication and repair
03420 Nucleotide excision repair
107036984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dam03021
]
107036984
03400 DNA repair and recombination proteins [BR:
dam03400
]
107036984
Transcription machinery [BR:
dam03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107036984
DNA repair and recombination proteins [BR:
dam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107036984
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
107036984
NCBI-ProteinID:
XP_015110808
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MTTPAASGQNLLRPTGLQCKDLHEYLKSLPSEVLEKLYHNPPICLAVFRELPVIARHYVM
RLLFVEQPVPQAVIASWCSKLHSEEHQRVVQVLNELNIWKEASIPGGLPGWILNATFKKN
LKIVLLGGGKPWTMSNQLETDSKPRDIAFLDSYALERWECVLHYMVGSQQQEGISADAVR
ILLHAGLMKRDEEDGSPVITQAGFQFLLLDTASQVWYFILQYLDTIQARSLDLVECLTFL
FQLNFSTLGKDYSTEGMSEGLLTFLQHLREFGLVYQRKRKAGRFYPTRLALNIATGKNKP
LVRDIEKEGYIVVETNYRVYAYTNSNLQVALLGLFCEMLYRFPNLVVSILTRDSVRQALK
SGITAAQIVGYLQQHAHSKMIEAGPPTLPPTIVDQIKLWENERNRFSFSEGVLYSQFLSQ
TDFVVLRDYALSIGVLIWQSDRKRTMVVTKVGHDDVKKFWKRYSKGSN
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaccagcagcaagtggtcagaatctcctgcgtcctacgggattgcagtgcaag
gatctccacgagtatttgaaatctctaccatcagaagtcttggagaagttgtatcacaat
ccaccgatatgtctagctgttttccgtgaactccctgttatcgccaggcactacgtcatg
cgcctgctctttgtggagcagccagtcccccaggcagtcatcgcctcctggtgctccaag
ctccactccgaggagcatcaacgagttgtgcaggtcctcaatgagttgaatatttggaag
gaggcgtccatacctgggggcctgccaggctggatcctcaatgctacattcaagaagaat
ctgaagatcgttctgctcgggggtggaaaaccctggacaatgtccaatcagttggagact
gatagcaaacctagggacatcgcttttctggactcttatgccttggagaggtgggagtgc
gtgctgcattacatggtgggatctcagcagcaagagggcatctcagcagatgctgtcagg
atattgcttcatgcaggccttatgaaacgagacgaggaagatggtagtcctgtcatcaca
caagcaggattccagtttcttcttctagacacagcatcccaagtgtggtacttcatactc
caatatctagatacgattcaggccagaagtctggatctcgttgagtgtctaacatttctg
tttcaattgaacttctccacacttggaaaagattacagcacagagggaatgtcagaagga
ttattaacatttctgcagcatctcagggaatttggactcgtgtaccagcgaaaacgaaag
gcgggcaggttttatccaacgagattggcgttgaacatagcaacagggaagaataaacca
ctcgtgagggatatcgagaaggagggctatatagttgtagaaacaaattacagagtctat
gcatacacaaattccaatcttcaagttgcattactcggtctcttctgcgaaatgctgtac
agatttccaaacttggtggtgtctatattgaccagagattcagtgcgacaggccttgaag
agtggaataactgcagcacaaatagtcgggtatctgcaacagcatgctcacagtaagatg
attgaggctggtcccccgacactgcccccaacaatagtagatcaaataaaactctgggaa
aatgagagaaatcgtttctcattcagcgaaggcgtcttgtacagtcagttcttgtcccaa
actgactttgtcgttcttcgagattatgcattatctattggggtgctcatctggcagagt
gacagaaaacgaactatggttgttaccaaagtgggtcacgacgatgtaaaaaaattctgg
aaacgctattcgaagggctcaaactga
DBGET
integrated database retrieval system
