Diachasma alloeum: 107039272
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Entry
107039272 CDS
T07663
Name
(RefSeq) histone deacetylase Rpd3
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
dam
Diachasma alloeum
Pathway
dam03082
ATP-dependent chromatin remodeling
dam03083
Polycomb repressive complex
dam04213
Longevity regulating pathway - multiple species
dam04330
Notch signaling pathway
dam04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107039272
03083 Polycomb repressive complex
107039272
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
107039272
04350 TGF-beta signaling pathway
107039272
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
107039272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dam03036
]
107039272
Enzymes [BR:
dam01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
107039272
Chromosome and associated proteins [BR:
dam03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
107039272
HDAC complexes
Sin3A-HDAC complex
107039272
BRAF-HDAC complex
107039272
REST complex
107039272
SHIP complex
107039272
MiDAC complex
107039272
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
107039272
Heterochromatin formation proteins
Other heterochromatin formation proteins
107039272
Chromatin remodeling factors
NuRD complex
107039272
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
107039272
NCBI-ProteinID:
XP_015114282
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MSTQPHSRKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
ADEMTKFHSDEYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESI
FVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGG
GGYTIRNVSRCWTYETSVALGCEIANELPYNDYFEYFGPDFKLHISPSNMGNQNTVEYLE
KIKTRLFENLRMLPHAPGVQVQAIPEDGATVEDSEAEEKVNPDERLPQRDLDKRIQHDNE
YSDSEDEGEGGRRDNRSFKGSRKRPRLEKGQESMETDIKKEDDAKSDIKENDKDDKVNAM
NEETKKESVNP
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacacagccccacagtaggaaacgtgtctgctattattacgatagcgatatagga
aactattactatgggcaagggcaccccatgaaaccccaccggataaggatgacacacaat
ttactactcaactatggactctacaggaaaatggagatttatcgtccacataaagcaaca
gccgacgagatgaccaagttccacagtgacgaatacataagattcctgcgatcaattcga
cctgataatatgtctgaatacaacaaacaaatgcaaagattcaatgtcggagaagattgc
ccagtgttcgacggactgtacgagttctgtcagctgtcagctggtggctcagtggcggca
gcagtaaagctgaacaaacaggcctcagaaatctgcataaactggggtggaggtctccac
cacgcgaaaaagagtgaagcctcaggattctgctacgtgaatgacatagtcctaggcatc
ctggagctcctaaaataccaccaaagagttctgtacatcgacatagacgtgcaccatggc
gatggtgtcgaggaggcgttctacacgacagacagagtgatgacagtgtccttccacaaa
tacggtgaatacttcccaggaacgggtgatctacgggacattggggctggcaaggggaag
tactacgccgttaacataccactgagggatggaatggacgacgagagctacgagtccatt
tttgttccaataatctcgaaggtcatggagacatttcagccatcagctgttgtgctccag
tgtggagctgactctctcactggtgatcgactcggttgcttcaacctgactgtcaggggc
catgggaaatgcgtggaattcgtcaagaagtataacttaccgtttctcatggtgggtggg
ggtggctacaccatcagaaatgtctccagatgctggacatacgaaacatcagttgctctt
ggctgtgaaatagccaatgaactaccttacaacgattatttcgagtattttggccctgat
ttcaagcttcacatcagtccgtccaatatgggtaatcagaatactgtggagtacttggag
aaaatcaagacgaggctctttgagaatctcaggatgctgcctcatgcacctggggtacag
gttcaggcgattcctgaggacggggcgactgtcgaggattcagaggctgaggagaaggtc
aatcctgatgagagactgccccagagggatttggataagaggatacaacatgacaatgag
tacagcgatagtgaggacgagggggaggggggcaggagggataacaggtcgttcaagggc
tccaggaagagacccaggctcgagaagggacaggagagcatggagaccgatatcaagaag
gaggatgatgccaaatcggatattaaagaaaatgacaaggacgacaaggtgaatgccatg
aacgaggaaacgaagaaagagagtgtgaatccttga
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integrated database retrieval system