Diachasma alloeum: 114841046
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Entry
114841046 CDS
T07663
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
dam
Diachasma alloeum
Pathway
dam03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
114841046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dam03400
]
114841046
Enzymes [BR:
dam01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
114841046
DNA repair and recombination proteins [BR:
dam03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
114841046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
DNA_ligase_A_C
Motif
Other DBs
NCBI-GeneID:
114841046
NCBI-ProteinID:
XP_028982209
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MTSIASQISFSTLCTVFEEIFTAKTNKNRQTLLSDFLEKCRAQSQSSTPPPSLFPILRLF
LLKLDRERGPNGLKERSLAVLYIRVFCLGKTSPDAKKLLNYKEPLRSKNNTNDFAERVFV
VLKPRLKKSSSLSVEDVNNFLDTISNQFSSNQKQDGEFIKIMEECSALEVKWLTRIILKD
LKLSMGSRKILDVFHPDADQLFAQKSNLKVVCETLGNPRERINTRVSSVSVFSPFKPMLL
ERLPITHIRKFFVDGRKTEFIIQTKFDGERSQVHVRDGRFKYFTRHGLEITKNPSYGETR
GARGFLTNKISSLLNPHCRSIILDGEMMGFHKEKKEFSTKGVPFDVKKLTFKSKHHPCLV
AYDILLYNDELLINKPLEYRLKVLEGAFEESPGVLLRAKNERVSSMDEIIASFNRAIDTH
EEGIVLKKIDSLYHIDTRDGSGCYKIKSDYSSELIQDVDLVIIGGHYGEGRHTGLFNSFL
TACVHPTSPTKTFYSVVSVSNGLTGNAIRSFNAKFSPFWTKNKPEVIVAPKKGLPDVWIH
PQHSIVLQIN
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaatcgcctcacaaatctcgttctccactctctgcactgttttcgaggagatc
ttcacggcgaaaactaacaaaaaccgccaaacactcctctccgatttcctcgaaaaatgt
cgagctcaatcccaatcgtcgacccctccccccagcctcttcccaattctccgtctcttc
ctgttgaaacttgacagggaacgagggcccaacggtctcaaggagaggtctctggcagtc
ctctacatcagagtcttctgcttggggaagacttctccagatgctaagaagcttctgaac
tacaaagagcccctcagatccaaaaacaacaccaacgactttgcagagcgagtcttcgtc
gtcctcaagcctcgtctgaaaaaatcatcctccctctctgtagaggatgtcaacaacttc
ctggacaccatctccaatcaattctcctcgaatcaaaaacaagacggtgaattcatcaaa
ataatggaagagtgttcagcgctggaggtgaaatggctgacgaggataattctgaaggat
ctgaagctgtcgatgggatcgaggaagattcttgatgtgtttcatcctgacgcggatcag
ctgtttgcccagaaatcgaatctgaaggtggtctgcgagaccctgggaaatccgagggaa
cggattaacacgagggtctcgagtgttagtgtgttctcgccgttcaagccgatgttgctg
gagcgattgccgattactcacatcaggaagttctttgttgatgggaggaaaactgagttt
attatccagacgaagttcgatggagagaggtctcaggtccacgtgagggacgggaggttc
aagtatttcacgagacacgggctcgagatcactaagaatccttcctatggagagacgagg
ggcgccagggggttcttgacgaacaagatctcttcgttgttgaatcctcattgcagatca
atcatcttagatggagagatgatgggatttcacaaagaaaaaaaagagtttagcacgaaa
ggagtgcctttcgacgttaagaaattaacattcaaaagtaaacaccatccgtgtctagtt
gcttacgatatccttctctacaatgatgaattactcatcaataagccgttggagtatcga
ttgaaggtgttggaaggcgcttttgaggagtcaccgggtgttttactgagagccaagaat
gagagagtttcttcaatggacgagatcatcgcatcattcaacagggctatagatacccat
gaagaaggaatcgttctgaagaagatcgacagtctgtaccatatagacactcgcgacgga
agcggctgctacaagatcaaatccgattactcctccgagctaatccaggacgtggacctg
gtgataatcggcggtcactacggtgaaggccgtcacaccgggcttttcaacagctttctc
acagcctgcgtgcaccccacctcccccaccaagacattctactcggtagtctccgtgagc
aacggcctcaccggcaacgccattcgctccttcaacgctaaattcagtcccttctggacg
aaaaacaagccggaagtgatagtcgcccccaagaaaggtctcccagacgtctggatccac
ccccaacactcgatcgtcctccagataaactag
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