Drosophila ananassae: 6493262
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Entry
6493262 CDS
T01059
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
dan
Drosophila ananassae
Pathway
dan03022
Basal transcription factors
dan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
6493262
09124 Replication and repair
03420 Nucleotide excision repair
6493262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dan03021
]
6493262
03400 DNA repair and recombination proteins [BR:
dan03400
]
6493262
Transcription machinery [BR:
dan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
6493262
DNA repair and recombination proteins [BR:
dan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
6493262
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
6493262
NCBI-ProteinID:
XP_001957376
FlyBase:
FBgn0087433
UniProt:
B3MAD1
LinkDB
All DBs
Position
Unknown
AA seq
497 aa
AA seq
DB search
MADTRTGRHAAAAGSSSSGISALTQSPANLECKDFQEYLRTRQTPETLEKLYNYPPICLA
VFRELPEIARQFIIRILFVDQPVPQAVVSSWGAQRCAKEQTDATSCLTALNVWRVTAIPG
GLSAWELSPTFKKSVRQVLLGGGKPWPMTNTLEKDSKPRDINFLDTYAMSRWRCVLHYMV
GTGSRNGAETEAISPDAVRILLHANLMKRDERDGITITRQGFQFLLLDTRAQVWHFMLHY
LDTCEERGMPLPECLSMLFQLSFSTLGRDYSSEGMNKQMLDFLQHLREFGLVYQRKRKEG
RFYPTRLALNVTSKEAAVAATLTTDEEGVQESGYIVVETNYRVYAYTDSPLQVAVLGLFT
ELLYRFPNLVVGVLTRDSVRQALRGGITAEQIVSYLEQYAHPNMRLVESAIQSKSCLPPT
VVDQIKLWEMERNRFTYTEGVVYNQFLSQNDFVTLRDYAQSIHVLVWQNERTRTMVVQKN
GHDDVKRYWKKYSKSGG
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacgagaacaggtcggcatgccgctgctgcaggcagtagtagcagtggaatt
tcggcactgacgcagagcccggccaacttggagtgcaaggactttcaggaatatttgcga
acgcgtcaaacgccggaaacgctagaaaagttgtacaactatccgccgatctgcttggcc
gtgttccgggagctgcccgagatagccagacagtttattatacggattctgtttgtggac
cagcccgttccccaagcagtagtttcctcgtggggtgctcaacgatgcgcaaaagaacaa
acggacgccacaagttgcctgactgcattgaatgtgtggcgggtgactgccattccagga
gggctgtctgcctgggaactctcacccacattcaagaagagcgttcgccaggtgctgttg
ggcggcggaaagccctggcccatgaccaacaccctggagaaggactccaagccaagggat
attaactttttggatacgtacgccatgtcccgctggcgctgcgtgcttcactacatggta
ggtactggtagtcgaaatggtgccgaaacagaggctatcagcccagatgccgtcaggatc
ttgttgcacgcgaatcttatgaagagggatgaacgggatggaatcactataacccgccag
ggttttcagttcctgcttctggataccagggcgcaggtctggcactttatgcttcactat
ttggatacgtgcgaggagcgaggaatgcccctgccagaatgcctctccatgcttttccag
cttagcttctccacgctgggaagggactatagctccgagggcatgaacaaacagatgctg
gacttcctgcaacacctgagggagttcggtctagtctaccagcggaagcgtaaggagggc
cgcttctaccccacccgcctggctctcaatgtgaccagcaaggaagccgctgtggccgcc
accctaactacagatgaggagggagttcaggaaagtgggtacattgtggtggaaactaac
tatcgggtgtacgcctacacagactccccactccaggtggccgttttgggcctcttcaca
gagctactctaccgctttcccaatctcgtagtgggcgttctcacccgggactcggtgcgc
caggcgctacgcggcggaataacagccgaacaaatagtctcgtatctggaacagtacgcg
catcccaatatgcggctggtggaatcggccatccagtcgaagtcatgcctgccgccgacc
gtggtcgatcagataaagctgtgggaaatggagcgcaatcggttcacgtatacggagggc
gtggtgtacaatcagttcctgtcgcagaatgactttgtcacactccgggattatgcccaa
tcgatccacgtgctggtgtggcagaacgagcgcactcggacaatggtggtacaaaagaac
gggcacgacgacgtgaagaggtattggaagaagtactccaagagcggaggctag
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