Pseudodesulfovibrio aespoeensis: Daes_2151
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Entry
Daes_2151 CDS
T01382
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
das
Pseudodesulfovibrio aespoeensis
Pathway
das03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
das00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Daes_2151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
das03019
]
Daes_2151
03016 Transfer RNA biogenesis [BR:
das03016
]
Daes_2151
Enzymes [BR:
das01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Daes_2151
Messenger RNA biogenesis [BR:
das03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Daes_2151
Transfer RNA biogenesis [BR:
das03016
]
Prokaryotic type
tRNA degradation factors
Daes_2151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH_2
Motif
Other DBs
NCBI-ProteinID:
ADU63157
UniProt:
E6VSR3
LinkDB
All DBs
Position
2362704..2364968
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AA seq
754 aa
AA seq
DB search
MLKPFDVTSLTTQVGGIDITIESGKYARQASGAVTIKSGGTVILVTSTTQPIEVDRGFFP
LTCNYQEMAYAAGRVPGNYFRREGRPSERETLISRLIDRPIRPLFAKGFADEVQIIATVL
SADKHVNPDVLALTGASAATHISKMPFLGPIVGARVGYVDNQFVLFPSYKGMEELSSLNL
IFAATREAMVMVEGGANFVSEDLVADALAWGHEQVKPLFDIQDELRSLVGVPKMEITAPI
QDAELVSFLGEFISDDLRAAVTTPEKMVRYAAKDAAKQKAKQAVAEKFPEDAAKLKAVSD
IVGDLTKKIVRERIVKEGLRIDGRDTTTVRALSIETGVLPMTHGSCLFRRGETSALAVAT
LGSTRDEQRYDSLLGDATKRFMLHYNFPPYCVGEARMLRGTSRREVGHGALAERAIAPVL
PNQDEFPFTIRVVSEIMESNGSSSMASVCGATLSLMDAGVPISAPVAGIAMGLCKENEQF
FVLTDILGDEDALGDMDFKVAGTRDGITSIQMDIKISGIPSDVLRKALYQAKDARVHILD
HMAEVLAEPRAELSDLAPQMAIVHIDPEKIRSVIGPGGKNIKAITAETEADIDIEDSGKI
SIFAPTLASMEKAKAMVLYYDQKPEPGKDYLGTVRKVLEVGALVEILPGQEGMLHVSQLD
IERVERVEDVVQLGQEVWVTCIALEPGGRIRLSRKAWLMKQAGQEVDIDEFKRPAPRSGD
RDGARRDDRGRGPRRDDRGGRDDRGGDRGGRGRR
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaccatttgacgtcacaagcctgaccacacaggtcggcggtatcgacatcacc
atcgagtccggcaaatatgccagacaggccagcggagccgtgaccatcaagtccggcggc
accgtcatcctggtcacatccaccacccagcccatcgaggtggaccgcggcttcttcccc
ctgacctgcaactatcaggagatggcctacgccgcaggccgcgtgccgggcaactacttc
cgccgcgaaggccgcccgtccgagcgcgagaccctgatctcccggctcatcgaccggccc
atccggcccctgttcgccaagggctttgccgacgaggtccagatcattgccacggtcctg
tcagctgacaagcacgtcaaccccgacgtgctggccctgaccggcgcgtccgccgcgacc
cacatctccaagatgcccttcctcggccccatcgtgggcgcgcgagtcggatacgtggac
aaccagttcgtacttttcccgtcctacaagggcatggaagagctctccagcctcaacctg
atcttcgccgccacgcgcgaggccatggtcatggtcgagggcggtgccaacttcgtcagc
gaagacctggtggccgacgccctggcctggggccatgagcaggtcaagccgctctttgac
atccaggacgagctgcgctccctggtgggcgttcccaaaatggagatcactgcgcccatt
caggatgcggaactggtctccttcctgggcgagttcatctccgacgacctgcgcgccgcc
gtgaccacgccagaaaagatggtccgctacgcggccaaggacgccgccaagcagaaggcc
aagcaggccgtggccgaaaagttccccgaggacgcggccaagctcaaggctgtcagcgac
atcgtgggcgacctgaccaagaagatcgtgcgcgagcgcatcgtcaaggaagggctgcgc
atcgacggtcgcgacaccaccacggtccgcgccctgtccatcgagaccggcgtgctgccc
atgacccacggctcctgcctgttccgccgcggcgagaccagcgccctggccgtggccacc
ctgggctccacccgcgacgagcagcgctacgactccctgctgggcgacgccaccaagcgg
ttcatgctccactacaacttcccgccctattgcgtgggcgaggcccgcatgctgcgcggc
accagccgccgcgaagtgggccacggagccctggccgaacgcgccatcgccccggtcctg
cccaatcaggacgagttcccgttcaccatccgcgtggtctcggagatcatggagtccaac
ggctcctcctccatggcctcggtctgcggcgcaaccctgtccctgatggatgcgggcgtg
cccatctccgccccggtggcgggcatcgccatgggcctgtgcaaggagaacgagcagttc
ttcgtgctcaccgacatcctcggtgacgaggacgccctgggcgacatggacttcaaggtg
gcgggcacccgcgacggcatcacctccatccagatggacatcaagatctccggcatcccg
tccgatgtcctgagaaaggccctgtatcaggccaaggacgcacgcgttcacatcctcgac
cacatggccgaggtgctggccgaaccccgcgccgaactgtccgatctggccccgcagatg
gccattgtgcacatcgacccggagaagatccgctcggtcatcggacccggcggcaagaac
atcaaggcgatcaccgccgagaccgaggccgacatcgacatcgaggattccggcaagatc
tccatcttcgccccgaccctcgcctccatggaaaaggccaaggccatggtcctctactac
gaccagaagcccgaaccgggcaaggactacctcggcacagtccgcaaggtgctcgaagtg
ggcgccttggtcgaaatcctgcccggccaggaaggcatgctccacgtctcccagctcgac
atcgagcgcgtggaacgcgtggaagacgtggtccagctcggccaggaagtctgggtcacg
tgcatcgcactcgagcccggcggacgcatccgcctctcccgcaaggcgtggctcatgaaa
caggcgggccaggaagtggacatcgacgagttcaagcgccctgccccgcgcagcggtgac
cgggacggcgcacgccgcgacgatcgcggacgcggaccgcgccgcgatgaccgcggtggc
cgtgacgaccgtggcggcgaccgcggaggccgtggccgccgctag
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