Desulfoglaeba alkanexedens: FDQ92_02245
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Entry
FDQ92_02245 CDS
T05964
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
dax
Desulfoglaeba alkanexedens
Pathway
dax00521
Streptomycin biosynthesis
dax00523
Polyketide sugar unit biosynthesis
dax00541
O-Antigen nucleotide sugar biosynthesis
dax01100
Metabolic pathways
dax01110
Biosynthesis of secondary metabolites
dax01250
Biosynthesis of nucleotide sugars
Module
dax_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
dax00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
FDQ92_02245 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FDQ92_02245 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FDQ92_02245 (rfbC)
Enzymes [BR:
dax01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FDQ92_02245 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QCQ21121
UniProt:
A0A4V1ERC1
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All DBs
Position
complement(444613..445167)
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AA seq
184 aa
AA seq
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MKIVSTPIPDVLIVEPRVFSDQRGFFFESYNEKEWRRLTGLNTHFVQDNHSRSVKGVLRG
LHYQIRRPQGKLVRVVVGEVFDVAVDLRKQSPTFGRWTGTVLSEENRRQLWIPEGFAHGF
LVLSEVAEFLYKATDYYAPQWERCVRWDDPDLGIAWPLSGPPVLSEKDRKAPALRDADAF
TDIS
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgtttccacaccgatcccggatgttctgatcgtggagccgcgggttttttcc
gatcagcggggcttctttttcgaaagctacaacgaaaaggaatggcggcgcctgacggga
ctcaacacgcatttcgtccaggacaaccactcgcggtccgtgaaaggcgtgctgcgggga
ctgcactaccagattcgccggcctcaaggcaagctggtacgcgtggtggtcggggaagtc
tttgacgtggcggtggatctccgaaagcagtcgcccaccttcggccggtggacgggaacc
gttctctccgaggaaaaccggcggcagttgtggattcccgagggttttgcgcacgggttc
ttggtgctttccgaggtggcggaattcctctacaaggccacggattactatgcaccgcag
tgggagcgctgcgtgaggtgggacgatccggacctggggatcgcgtggcccctttccggc
ccaccggtcctttcggaaaaggatcgaaaggctccggctctccgcgatgcagatgccttc
accgacatttcctga
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