Drosophila arizonae: 108613941
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Entry
108613941 CDS
T05886
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
daz
Drosophila arizonae
Pathway
daz03022
Basal transcription factors
daz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108613941
09124 Replication and repair
03420 Nucleotide excision repair
108613941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
daz03021
]
108613941
03400 DNA repair and recombination proteins [BR:
daz03400
]
108613941
Transcription machinery [BR:
daz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108613941
DNA repair and recombination proteins [BR:
daz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108613941
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
108613941
NCBI-ProteinID:
XP_017863239
LinkDB
All DBs
Position
4
AA seq
492 aa
AA seq
DB search
MADTKSGRHASTSAATPLLVQSPENLECKNFQEYLRTRQTPESLEKLYSYPPICLAVFRE
LPEIARQFVIRILFVDQPVPQAVVSSWGAQRVAKEQLEATNCLSALSVWRVTAIPGGLAA
WELSPTFKKSVRQVLLGGGKPWAITNSLERDSKPRDVAFLDAYAMSRWRCVLHYMVGTGN
RSNTETEAISPDAVRILLHANLMKRDEREGITITRQGFQFLLLDTRAQVWHFMLQYLDTC
QERGLVLAECLSMLFQLSFSTLGRDYSSEGMNKQMLMFLQHLREFGLVFQRKRKEHRFYP
TRLALNVTNKEAAEASISVDEERMQERGYIVVETNYRVYAYTDSQLQVAVLGLFTELLYR
FPNLVVGVLTRDSVRQALRGGITAEQIVSYLEQYAHPNMKLVESAIQSKSCLPPTVVDQI
KLWEMERNRFTYTEGVVYNQFLSQNDFVTLRDYAQSQNVLVWQNERTRTMVVQKNGHDDV
KRYWKKYSKSAG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggccgatacaaaatccggccgtcatgcgagcaccagcgctgcaactccacttctggtg
cagagccccgagaacctggagtgcaagaactttcaggaatatctgcgcacccgccagaca
cctgaatcattggagaagctctacagttatccacccatttgcctagctgtcttccgcgag
ttgcctgaaattgcaagacaatttgtgattcgtatactattcgttgaccaacccgtacca
caggccgttgtcagctcatggggcgcccaacgtgtggccaaggaacaactggaggcaacc
aactgcttgtctgccttatctgtttggcgtgtgacagccataccaggtggactagctgcc
tgggagctatcccccacatttaagaagagcgtgcgccaagtgttgttaggtggaggaaag
ccctgggcaattaccaattcgctcgagagggactccaagccacgggatgttgcattcctt
gacgcrtatgccatgtctcggtggcgttgtgtgctgcattacatggtgggtacgggaaat
cgaagtaacaccgaaactgaggccatcagtccagatgccgtacgcattctactccatgca
aatcttatgaagcgcgatgagcgggagggcattaccatcacacgtcaaggatttcagttc
ttgctkctggacacacgagcccaggtctggcatttcatgctgcagtatttagatacgtgc
caggaacgtggcctggtcttggccgagtgtctgtcaatgctctttcaattgagcttctct
acgctggggcgcgactacagctctgarggcatgaacaagcagatgctgatgtttctccag
cacctgcgggagttcggyctggtatttcaaaggaaacgcaaagagcatcgcttttatccc
acgcgaytagcgttaaatgtaactaacaaggaagcagcagaagcatccatttcggtggat
gaagagcgcatgcaggagcgaggctacattgtggtggagaccaactatcgcgtatatgcc
tacacagactcccagttgcaggtcgctgtgctgggccttttcaccgagytgctctatcga
tttcccaatctcgtagtgggcgtgctcacccgagactctgtgcgtcaagctctgcgaggc
ggcattacggccgagcaaatagtcagctatttggagcagtatgcacatcccaacatgaaa
ttggttgartctgcaattcaatcaaaatcctgcctgccacccaccgtcgtggaccaaatc
aaactgtgggagatggaacgcaatcgtttcacttacaccgagggagttgtctacaatcag
ttcctctctcagaatgacttcgtaacgctgcgcgactacgcccaatcccagaatgtgttg
gtctggcaaaacgagcgcacccgsaccatggtcgtgcaaaagaatggccacgacgatgtc
aagcgctattggaagaagtactcaaagagcgccggctag
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