Desulfotomaculum nigrificans: Desca_2183
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Entry
Desca_2183 CDS
T01498
Name
(GenBank) type II secretion system protein E
KO
K02652
type IV pilus assembly protein PilB
Organism
dca
Desulfotomaculum nigrificans
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
dca02044
]
Desca_2183
02035 Bacterial motility proteins [BR:
dca02035
]
Desca_2183
Secretion system [BR:
dca02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Desca_2183
Bacterial motility proteins [BR:
dca02035
]
Pilus system
Pilus assembly proteins
Desca_2183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_22
AAA_16
nSTAND3
AAA_14
AAA_11
AAA_23
AAA_30
AAA_29
ResIII
NTPase_1
AAA
ABC_tran
cobW
AAA_7
ATPase_2
AAA_19
Zeta_toxin
DUF2614
Rad17
DEAD
MobB
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AEF95022
UniProt:
F6BA53
LinkDB
All DBs
Position
complement(2302486..2304192)
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AA seq
568 aa
AA seq
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MALGTMKKRLGDLLVDSKLITQQQLQEALAAQKVTGERLGQTLINLGFVREEDILNALEM
QLGIPKISLANRINPALIKSLPESIIRRHRVIPVSREGNRMIVAMFDPLNVVALDDIRLT
TGCEVDPVIAPQSEIDQAIQRVFGLSFVQDAFQTTETEDDNQLASQTLSFGDEAGTDDSP
VVRLVNTIIKQAVNDHASDIHIEPLRDQVRVRFRIDGLLHETTLLPRSTLSTLVTRIKIL
ANLDIAEKRLPQDGRFQVKYGNKEVDIRVATLPTVFGEKIVMRLLAKNTGIMRIDQLGFS
QQNLQAFTGIIRHSYGMLLITGPTGSGKTTTLYAVVNQLNNKESNIVTIEDPVEYVVPGV
NQTQVNNKAGLTFATGLRSLLRQDPDVIMIGEIRDTETAAIAVKAATTGHLVLSTLHTND
AAGAITRLIDMGVEPFLVASSLIGVVSQRLVRVLCPHCKEPYEPVADSPERDFLGMQSNQ
PVTLYRPKGCHNCNNIGYKGRTTIQEVLPVSDVIRQLTKERATEQEIKAQAKREGMITMR
EVGVQKVLAGITSVREVMRVAFTGEEIK
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggctcttggtactatgaaaaaacgcctgggggatttgctggtggatagtaaattaatc
acccagcagcagctgcaagaagccctggcggcccagaaggtgaccggtgagagactgggt
cagaccttaattaacctgggttttgttcgggaggaagatatacttaatgcactggagatg
cagttgggtatcccgaaaatttccctggccaacagaataaatcccgctctgattaaaagt
ttgcctgaaagcatcatcaggcgccaccgggttatcccggtgagccgagaaggtaaccgg
atgattgtagccatgtttgacccccttaatgtggtggcgctggatgacattcgtttaacc
accggttgtgaggttgatcctgtaattgctccccagtcggagattgaccaggccatccaa
agggtctttggtttgtccttcgtacaggatgcctttcagaccacagaaacagaggacgat
aaccaattagccagccaaaccctgagttttggggatgaagccggtaccgatgattccccg
gtggtgcgcctggttaacaccattattaaacaggctgttaatgaccacgccagtgatatt
catattgaacctttgcgggatcaggtgcgggtccgtttccgcattgacgggttgctgcat
gaaaccaccctgttaccccgctccaccctgtcaaccctggtgaccagaataaaaatattg
gcgaacctggatattgcggaaaaaaggttaccccaggacggccggtttcaggttaagtac
ggtaataaagaggttgatataagggtagccaccttacccactgtgtttggtgaaaagata
gttatgcgattgttggcgaaaaacaccggtatcatgagaattgaccagttaggctttagc
cagcaaaacttacaagcctttaccggtattattcgccattcctacggcatgcttttaatt
accggccccaccggtagtggtaaaacaaccactttatatgccgtggtaaaccagctgaac
aacaaagaaagtaatattgtcaccattgaagacccggtggaatatgtggtgcccggggtt
aaccaaacccaggtgaacaacaaagccggactgacatttgccaccgggttaaggtcactg
ttacgccaggacccggacgtaattatgatcggagaaattcgggatacggaaactgccgcc
attgccgttaaagcagccaccaccggtcacctggttttaagtaccttacataccaacgat
gccgccggggccattaccaggctcattgatatgggcgttgaaccttttctggtggcttct
tctctcattggggtggtcagccagcggctggtgcgggtactatgtcctcattgcaaggaa
ccatatgaaccggtggcagatagtcccgaacgggatttcctgggtatgcagtctaaccaa
ccggttaccctttaccgaccaaagggttgccataactgtaacaatattggctataaaggg
agaaccaccatccaggaagtattgccagtatccgatgtcatcaggcagctgacgaaggaa
cgggccaccgaacaggaaattaaagcccaggctaaacgggaaggtatgatcaccatgcgg
gaagtgggtgtgcaaaaggtgctggcaggcattacttcggtaagagaggtaatgcgggtg
gcatttaccggggaggaaattaaatga
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