Dermochelys coriacea (leatherback sea turtle): 119850803
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Entry
119850803 CDS
T09064
Symbol
THOC1
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03013
Nucleocytoplasmic transport
dcc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119850803 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
119850803 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcc03019
]
119850803 (THOC1)
03041 Spliceosome [BR:
dcc03041
]
119850803 (THOC1)
Messenger RNA biogenesis [BR:
dcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
119850803 (THOC1)
Spliceosome [BR:
dcc03041
]
Complex C
Other components
EJC/TREX
119850803 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119850803 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
CTD7
Motif
Other DBs
NCBI-GeneID:
119850803
NCBI-ProteinID:
XP_043363957
LinkDB
All DBs
Position
2:complement(84702312..84738158)
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AA seq
657 aa
AA seq
DB search
MSPPLFSLPEARLRFTNSTRDALTNKTIKPLLNAFNQIPGSENEKKCTLDQSFRVVLEEE
IINQASCENVLAIISLAINGVTDGICTASTPFVLLGDVLDCLPLDQCDKIFTFVEKNVTT
WKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQFN
LENVTVFNTNEQESTLGQKHIEERDEGMEVEEGEMGDDEAPTSCSIPIDYNLYRKFWSLQ
DYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKLEELKTGGEHVYFAKFL
TSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKLVYQ
VTSFRNPPDGERFSKMVEHILNTEENWNPGKMXGCPSFVKERPSDSKPTRLVRKRPAPED
FLGKGPNKKNSHGEVIXTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMVE
NEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEIK
TGEDEDEEDNDALLKENNESPDVRRDKPVTGEQIESFANKLGEQWKTLAPYLEMKDSDIK
QIESDSEDVKMRAKQLLVAWQDQEGIHATPENLITAMNKAGLSDLAESLTNDTENSS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgccgctcttcagcctccccgaggcgcggctccgcttcacgaattctactcga
gatgctttgaccaacaaaactatcaaacccttattgaatgcattcaaccagattcctgga
agtgaaaatgaaaagaaatgcaccctggatcaatctttcagggttgttctagaagaggaa
attataaaccaagcttcatgtgaaaatgtcttggctattatttctcttgctattaatggc
gttacagatggtatctgtacagcatcaaccccttttgtgcttctgggagatgttctggat
tgcctgcctttggatcagtgtgacaaaatttttacctttgtcgaaaaaaatgtcactaca
tggaaatcgaatacattttattcagctgggaagaattacttgctgagaatgtgcaacgat
ctcctaagaagattatctaaatcacagaacacagtcttctgtggaagaattcagctattc
ctggctagattatttcctctttcagagaagtcaggactcaatttacaaagtcagtttaat
ctggaaaatgtcacagttttcaatactaatgaacaagagagcactctaggacagaagcac
atagaggagagagatgaaggaatggaagtagaagaaggtgaaatgggagatgatgaagcg
cctacaagttgctccattccaatagattacaacctgtatagaaaattctggtcgcttcag
gattactttaggaatcctgtgcagtgctatgagaagatctcgtggaagacatttcttaag
tactctgaagaagttttggctgtttttaaaagctacaaattagatgacacgcaggcctcc
agaaaaaagttggaagaactaaaaacggggggagaacacgtctactttgcaaagttctta
actagtgaaaagctaatggatttacagctgagtgacagtaactttcgccgtcacatcttg
ctacaatatctaatactatttcagtacctaaagggacaggtcaaatttaaaagttcaaac
tacgttctaactgatgaacagtccctctggattgaagatactacaaaactggtttaccag
gtcacttctttcagaaaccccccagatggggaaagattctcaaaaatggtagagcatata
ttaaacactgaagaaaactggaaccctggaaaaatgnnaggctgcccaagttttgtgaaa
gaaagaccatcagattccaagccaacaagacttgtgagaaagaggccagctccagaggat
ttcctagggaaaggaccaaacaagaaaaattctcatggggaagtaatctaaactcggctt
tggaatttatgtccagacaacatggaagcttgtaaatctgagactagggaatatatgccg
acactggaggaattctttgaagaggctattgagcaggcagatcctgaaaacatggttgaa
aatgagtataaggctgtgaacaactctaattatggatggagagcattaagattactagca
cgcagaagtccccacttcttccagccaaccaatcaacaatttaagagtttaccagaatac
ttagaaaacatggtaatcaaattagccaaggagttgcctcctccttctgaagaaataaaa
acaggagaggatgaagatgaggaagataatgatgctttattaaaggaaaacaatgaaagt
ccagatgtacgacgagacaaacccgtgacaggggaacaaattgaatcatttgctaacaag
cttggagaacagtggaagactctggccccctacttggaaatgaaggactctgatataaaa
cagattgagtcagatagtgaggatgtgaagatgagagcgaagcagctgctggttgcctgg
caggatcaagaggggatacatgcaacacctgagaatctgattactgcaatgaacaaagct
ggattaagtgaccttgcagaaagcctaactaatgacactgaaaacagtagttaa
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