KEGG   Dermochelys coriacea (leatherback sea turtle): 119857681
Entry
119857681         CDS       T09064                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
dcc  Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dcc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    119857681 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dcc03400]
    119857681 (TDP1)
DNA repair and recombination proteins [BR:dcc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     119857681 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho
Other DBs
NCBI-GeneID: 119857681
NCBI-ProteinID: XP_038262859
LinkDB
Position
6:96579835..96710977
AA seq 609 aa
MSQESEHGKWTVSSSDESTEENDDAEKPSTSSLSLSGHGKTSGSQYPCSEGRKVGQKRKA
SPVKFSDKIFSTEISPAKIQRTSQEGLGWCLSSSDEEPVSEGQPKHAQKEAVKEEKFSAP
KKQPSHRCEDNELPVSQKPEKHYKVASEGQDTWDLLNGGNPFRFFVTKVKGIKSKYNSGA
LHIKDILSPLFGTLVSSAQFNYCIDVEWLIRQYPQEFRKKPLLIVHGEKRESKAELHAQA
HPYENVRLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIDADWDQKTQGIWLSPLY
PRLPHGTTGSAGESVTNFKSDLMLYLMTYNSPTLKEWADIIQEHDLSETRVYLLGSTPGR
YQGNQKEKWGHLRLRKLLKEYTSPIPAQESWPVIGQFSSIGSMGADQSKWLCSEFQESLV
TLGSSVKTLAKPDIPIHLIYPTVDNVRQSLEGYPAGGSLPYSIQTAQKQLWLHSYFHKWS
AETSGRSHAMPHIKTYMRPSPDFQKIAWFLVTSANLSKAAWGALEKNGTQLMIRSYELGV
LFLPSAFGLDTGYFHVKKKMFSGSNEPVTSFPVPYDLPPEQYGSKDRPWIWNIPYTKAPD
THGNMWVPS
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgtctcaagaaagtgagcatgggaaatggacggtatccagcagtgatgaaagtacagaa
gaaaatgatgatgctgagaagccatctacatcatctttgtctctcagtggacatggcaaa
actagtggatcacagtacccatgttcagagggcagaaaagttggtcaaaagagaaaagcc
tcccctgtgaaatttagtgataaaattttttctacagagatttcaccagcaaaaatccag
agaacttcccaagaaggattaggctggtgcctttcaagtagtgatgaggaacctgtatct
gaaggtcagccaaagcatgcacaaaaggaagcagtcaaagaggagaaattcagtgcacct
aaaaagcagccttcacatagatgtgaagataatgagctcccagtgagccaaaagccagaa
aaacattataaggtagcaagtgaaggccaggacacttgggatttgttgaatggagggaac
cctttcagattctttgtcactaaagtcaaaggtattaagtctaagtacaactctggagcc
cttcacataaaagatattttgtctcctctctttgggactcttgtatcttctgctcagttt
aactattgtatagatgtggaatggctcataagacagtatccacaggaattcaggaaaaaa
ccattattaatagtacatggtgaaaagcgagaatccaaggctgaactgcatgcacaggcg
cacccatatgaaaatgttcgcctttgccaggctaagctggatattgcctttggaacccac
cacacgaaaatgatgttgttgttatatgaagaaggtcttcgagttgtgatacacacatcc
aatcttattgatgctgattgggaccagaaaactcagggaatatggttaagccccctatat
ccacggctaccgcatggaaccactggttctgctggtgaatctgtaaccaattttaagtct
gacctaatgctctatctgatgacttataattcccctactctcaaggaatgggctgacatc
atccaagagcatgatctttcagagacaagagtatatctgcttggatcaaccccaggacga
taccaaggcaaccaaaaagaaaaatggggtcaccttagacttaggaagcttttgaaagag
tatacatcaccaataccagcacaagaatcttggccggtgataggacagttttcaagtatt
ggatcaatgggagcagaccagtccaaatggttgtgttcagaatttcaagagagcctggtt
acgctaggcagtagtgtgaagactctagcaaaacctgacattcctattcatttgatttac
cctactgtggacaatgtgaggcaaagtttggaaggctatcctgctggtggctctcttcca
tacagtatacaaactgcacagaaacaactttggctgcactcttatttccataaatggtca
gcagaaacttcaggccgcagtcatgctatgcctcacattaagacttacatgaggccatct
cctgacttccagaagattgcatggtttttagttacaagtgccaatctttccaaagccgct
tggggagctctggagaaaaacggcacccaactgatgattcgttcctatgaacttggagtc
cttttcctgccttcagcatttggattggatacaggttacttccatgtgaagaagaaaatg
ttttcaggaagtaatgagccagtgacctcttttcctgtgccttatgatctacccccagag
cagtatggaagcaaagatcgcccatggatctggaatattccttataccaaagcacccgat
acacatggaaacatgtgggttccatcataa

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