Dermochelys coriacea (leatherback sea turtle): 119861126
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Entry
119861126 CDS
T09064
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03013
Nucleocytoplasmic transport
dcc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119861126 (UPF3B)
03015 mRNA surveillance pathway
119861126 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcc03019
]
119861126 (UPF3B)
Messenger RNA biogenesis [BR:
dcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
119861126 (UPF3B)
mRNA cycle factors
P-body specific factors
119861126 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
119861126
NCBI-ProteinID:
XP_038271634
LinkDB
All DBs
Position
9:91074769..91085284
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AA seq
465 aa
AA seq
DB search
MKEDKENTRPKEKRAPGAPLDLRGGGEPERPKDKKETLSKVVIRRLPPSLTREQLEEHLQ
PLPEHDYFEFFANDSSLYPHMFSRAYINFKNQEDIVLFRDRFDGYVFVDHKGQEYAAIVE
FAPFQKSAKKKNKKKDAKTGTIDDDPEYKKFLESYSADDEKLTSTPETLLEEIEARNKEL
IAKKTTPLLNFLKNKQRLREEKREERRRRELERKRQREEERRKWKEEERRKRKEAEKQKK
VDKCPEKERDKSKDEPKIKLLKKPEKDERDLEKKEKFKKLEKENVREEKAAGALSSVSAK
RPDGETKEEKAKKSEDEYGKDYRDRERDLEREREYERLHREKQRRQDEERRRQKERFEKE
KVFRRKEEEMKKEINSLREKGRKSDLPDFTGNTEKAEKITKDDKKEDAAKRDRIRNKDRP
AMQLYQPGGRSRSRLCPYEDIATKSADQGVDKKQESETSNTKEEE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggataaggagaacactaggcctaaggagaagcgggcgcccggggcacccctg
gatctcagggggggcggggagcccgagcggcccaaggacaagaaggagacgctcagcaag
gtggtaattcgacgcttgcctcccagtttgaccagggaacaacttgaagaacatcttcag
cctttgcctgaacatgactattttgaattctttgctaacgattccagtttgtatcctcac
atgttttccagagcatacatcaactttaaaaaccaagaagacatagtactgttcagggat
cgttttgatggttatgtttttgttgatcacaaaggtcaggagtatgctgccatagtagaa
tttgcacctttccaaaaatctgcaaaaaagaagaataagaaaaaggatgccaaaactggg
actattgatgatgacccagagtataagaagtttttggaaagttacagtgcagatgatgaa
aaattaacatcaactcctgaaacactactagaggaaatagaggcaagaaacaaagagtta
atagctaaaaagacaactccccttctgaacttcttgaaaaacaaacagagactgagagaa
gaaaaaagagaggagaggagaagaagggaactggaaagaaaaagacaaagggaagaagaa
aggaggaaatggaaagaagaagaaagaaggaagagaaaagaagcagaaaaacagaagaaa
gttgacaaatgcccagagaaagaaagggataaatcaaaggatgaaccaaagattaagcta
cttaagaaaccagagaaagatgaaagagacttggagaaaaaggaaaagttcaagaaactg
gaaaaagaaaatgtgagggaggaaaaggctgctggcgcactaagcagtgtgtcagccaaa
cgacccgacggagagactaaagaagagaaggcaaaaaaatctgaagatgaatatggaaaa
gattacagggaccgggagagagacttagaaagagagagagaatatgagagactgcatcgg
gagaaacagagacgccaagacgaagagcgtcgtaggcagaaggaacgctttgagaaagaa
aaagtttttagaagaaaagaagaagagatgaaaaaggagataaactcactcagagagaaa
ggaaggaaaagtgatcttccagactttacaggcaacacagaaaaagctgagaaaataacc
aaagatgacaaaaaagaggatgcagctaagagagatcgcatcagaaacaaggatcgtcca
gcaatgcagctataccagccaggaggtcgaagtcgaagtagactgtgtccttatgaagac
attgctaccaagtctgcggaccaaggagtagataaaaaacaggaaagtgagaccagtaat
acaaaagaagaggagtga
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