Dermochelys coriacea (leatherback sea turtle): 119863698
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Entry
119863698 CDS
T09064
Symbol
IFIH1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1 isoform X1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04622
RIG-I-like receptor signaling pathway
dcc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
119863698 (IFIH1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119863698 (IFIH1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
dcc04054
]
119863698 (IFIH1)
Enzymes [BR:
dcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119863698 (IFIH1)
Pattern recognition receptors [BR:
dcc04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
119863698 (IFIH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
CARD_2
RIG-I_C
DEAD
ResIII
Helicase_C
CARD
SWI2_SNF2
SNF2-rel_dom
Tau95_N
DUF3638
Motif
Other DBs
NCBI-GeneID:
119863698
NCBI-ProteinID:
XP_038278395
LinkDB
All DBs
Position
11:complement(34938364..34979135)
Genome browser
AA seq
1011 aa
AA seq
DB search
MAALSPEEQFLYLISCFRHRLTQSIRVAPVLDRLATLSLQEKERIRAVAAQQGDAQAAGL
LLDAVTRGCQQQGWIQQFVTALRQGGSDLAACYVNPSLSELPSPAEETEHDVCVHLVQLL
YGTLVDKLRSRQVTNKCVEKGLLQDDDRERILAAAENHGDREGARELLSRIIKKKDWFSP
FLAVLHETKHGNLADELSGNVPETENKENGIKQPATRDVDMEAEEPLASEVGEELKQRDE
MNDSLARESIILGTSFEDTSVVSEFDISLPDASVSCLNESMGHSSTTSGDSDEDNTDKRA
SPEPELILRDYQMEVAKPALNGENVIICLPTGSGKTRVAVYITKEHLDKKKRASEPGKVI
VLVNKVPLVEQHFRKEFNPFLKRWYRVTGLSGDSQLKISFPEVVRKNDVIISTAQILENS
LLNATTEDDEEDVQLSDFSLIVIDECHHTQKEGVYNNIMRRYLKEKMKNNKFRKENKPLI
PQPQILGLTASPGVGGARTPQKAEEHILKICANLDAYRLMTVEEHVPQLKDQVKEPHKKF
VIANDKRRDPFREKITEIMTEIQNYCHLNPTSEFGTQPYEQWAVKEEKKAAKEENRKERA
CAEHLKKYNDALQINDTIRMIDAYNHLNNFYKEEKSKKTTVNEDDADEPVASKLDETDKF
LIKLFYAKKKQLKELAGKPEYENEKLTQLRNTLMEEFTKTDEARGIIFTKTRQSAFALFQ
WIKDNTKFEEAGIKAHYLIGAGHNSEFKPMTQNEQREIISKFRAGKVNLLIATTVAEEGL
DIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVASGGSGAVERENVNIFREQMMYK
AIQRVQRMRQEEYLNKIQGFQMQSIMEKKMKAKRDQLKTYKANPSLITFLCKNCHKLKCS
GEDIQVIENMHHVNVKKEFQDLYSIRENKTLQEKHADYQTNGEITCKDCGQAWGNMMVHR
GIDLPCLKIRNFVVVFKDKKTSNKIFKKWGELPIKFPVFDYAEHYVSSDED
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggcggccctgtcgcccgaggagcagttcctctatctgatctcctgcttcaggcaccgg
ctcacgcagtccattcgggtggcgccggtgctggaccgcctggccacgctgagcctgcag
gagaaggagcggatccgggcggtcgctgcgcagcagggcgacgcgcaggcggctgggttg
ctgctggacgcggtgacgcggggctgccagcagcagggctggatccagcagtttgtcact
gcgctgcggcaggggggcagcgacttggccgcctgctacgtgaaccccagcctgagcgag
ctgccctccccagcggaggagaccgagcacgacgtgtgcgtgcacctggtgcagctgctc
tatggcaccctggtggacaagctgaggagccggcaggtcaccaacaagtgtgtggagaag
ggactcctccaggacgatgaccgggagcggatcttagctgcagctgaaaatcatggggat
agggaaggtgcacgtgagttgttaagtagaataataaagaagaaagattggttctctcca
tttttggctgtcctgcatgaaactaagcatggaaaccttgcagatgaactaagtggaaat
gtaccagaaacagaaaataaagaaaatgggatcaagcaaccagctactagagatgtggac
atggaagctgaagagccattggcctctgaagtaggggaggagctgaagcagagagatgaa
atgaatgatagtctggccagagagagcattatattaggaacatcttttgaagacacttct
gtagtttcagagtttgatatcagtttgccggatgcaagtgtcagttgcttaaatgaaagt
atgggacatagtagcaccacaagtggtgattcagatgaggacaatacggacaaaagagct
tcccctgaaccagagctgattctccgagattaccagatggaggttgcaaaaccagcactg
aatggggagaatgttataatatgtctccctacaggcagtggtaaaaccagagtggctgtt
tatattaccaaagagcatttggataagaagaaaagagcatcagagcctggaaaagttata
gtacttgtgaataaggtaccattagtggagcagcatttcagaaaagagttcaacccattc
ctgaagcgctggtatcgggttactggattaagtggtgattctcagttgaaaatctcattt
cctgaagttgtaagaaagaatgatgtcattatcagtactgcccagatccttgagaattca
ctgctgaatgcaaccacagaagatgatgaagaagatgtccagttatcagacttttctctc
attgttattgatgaatgtcatcacacccagaaggaaggcgtctataacaatataatgcga
cgttatttaaaagaaaagatgaaaaacaataaattcagaaaagaaaacaaacccctgatt
ccacagcctcagatcctgggactaactgcttcacctggcgtgggaggggcaagaactcct
cagaaagctgaagaacatattctgaaaatttgtgctaatcttgatgcatatagactcatg
acagttgaagaacatgtcccccagctgaaagatcaggtgaaggaaccacataagaagttt
gtgattgcaaatgacaaaagaagggatccctttagagagaaaattacagaaatcatgaca
gagattcaaaattattgtcacctcaacccaacatctgaatttggaactcagccctatgaa
cagtgggcagttaaagaagagaaaaaagctgcaaaagaagaaaaccgtaaagaacgtgct
tgtgcagagcatttaaagaaatataatgatgccctgcaaattaatgacactatccgaatg
atcgatgcatacaaccacctaaataacttctataaggaagagaaaagcaagaaaacaaca
gtaaatgaagacgatgctgatgaaccagtagcatcaaaactagatgaaacagataagttt
ctgataaagttattttacgcaaaaaagaaacagctgaaagagttggctggaaagccggaa
tatgaaaatgagaagctgacacagttgcgaaacaccttaatggaggagttcacaaagacc
gatgaagctaggggaattatcttcacaaagactcggcaaagtgcatttgccctttttcag
tggattaaggacaacacaaaatttgaagaagcaggaattaaagctcactaccttattgga
gctggtcataacagtgaatttaaacccatgactcagaatgaacaaagggaaatcatcagt
aaatttcgtgctgggaaagtcaacctacttattgctactactgtggctgaagaaggcctg
gatatcaaagagtgtaacatagttatccgctatggtcttgtcaccaatgaaatagctatg
gtgcaggcccggggccgagctcgagctgatgaaagcacctatgtactggtggcatcaggt
ggatcgggagctgttgaacgtgaaaatgttaatatatttcgtgagcaaatgatgtataaa
gctattcaacgtgtccaaaggatgaggcaggaggaatatttaaataagattcagggtttt
cagatgcaaagtataatggaaaaaaaaatgaaggcaaagagagatcagcttaagacttac
aaggcaaatccatcactaataactttcctttgcaaaaattgccacaaactgaaatgttct
ggggaagatatacaagttatagaaaacatgcatcatgtcaatgtgaaaaaggagttccag
gacctttacagcataagagaaaataaaacactgcaagaaaaacatgccgattaccaaaca
aatggtgaaattacatgcaaagactgtgggcaagcttggggaaatatgatggtgcaccga
ggtatagacctgccttgcttaaagatcagaaattttgtagttgtattcaaggataagaaa
acctcaaacaaaattttcaaaaaatggggagagctgccaatcaagttccctgtctttgac
tatgcagagcattatgtttccagtgacgaagattaa
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