Dyadobacter chenwenxiniae: MUK70_12570
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Entry
MUK70_12570 CDS
T08907
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
dcn
Dyadobacter chenwenxiniae
Pathway
dcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUK70_12570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcn03019
]
MUK70_12570
Enzymes [BR:
dcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MUK70_12570
Messenger RNA biogenesis [BR:
dcn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MUK70_12570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
UON85816
LinkDB
All DBs
Position
2961325..2962653
Genome browser
AA seq
442 aa
AA seq
DB search
MTFEELNLTKPLLQALADLNYETPTTIQHKVFSVMMSGKDVCGIAQTGTGKTFAYLLPTL
RQLEFSKDRLPQLLILVPTRELVVQVVEEVRKLSAYLTLQVVGAYGGGNIKVQMAELANG
ADVVVATPGRLFDLALNGSLKTKAIKKLVIDEVDEMLNLGFRTQLKNILDLLPQKRQNLL
FSATLTSEVEALMQTYFNNPVRIEAAPVGTPLDNIEQKAYYVPNFYTKVNLLDLLLEENE
DMSKVLVFVATKKLADQLFGQLELGYLNKIGVIHSNKEQNHRFNTVKQFHEGNYRILIAT
DIIARGLDVAEVSHVFNFDIPEVPENYIHRIGRTGRADKKGVAISFITEGEKERQEQIEA
LMNYEIPIETLPENLRMSEILTPDEEPQIYMKSIDVKLPKREAGGGAFHEKIDKNKKVNV
RRNHAQEKMQKYGRPIKRSGKK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgaagaattaaatctcaccaagccgctactgcaagccctagccgatctgaac
tacgaaacgcccacaacgatccagcacaaggtgttttctgtcatgatgtctggtaaagat
gtgtgtggtattgcgcaaaccgggactgggaagacatttgcatacctgcttcctacactt
cgccagcttgaattttcaaaggaccggcttccgcaattgctgatcctggttccaacgcgt
gagcttgtggtgcaggttgtggaggaggtgcgaaaactaagtgcttacctgacattgcaa
gtggtaggtgcatatggcggaggcaacattaaggtgcagatggccgaactggcgaacggt
gcggatgtggtggtagcaacgccgggcagacttttcgatctcgctctcaatggttctcta
aaaacaaaggcgatcaaaaaacttgttatcgacgaagtggacgaaatgctaaacctcggc
tttcggacgcaactgaaaaacatattagaccttctcccgcaaaaacgccagaacctgctt
ttctcggcaacattgacgtcggaagtggaagcattgatgcagacctacttcaacaacccg
gtaaggatagaagcagcgcccgtgggaacgccattggataatattgagcaaaaagcctat
tacgttccaaacttttacacgaaagtgaacctgttggatttgttgctggaagagaatgag
gacatgagcaaagtccttgtgtttgtagcaaccaaaaaacttgcggatcagctcttcggg
cagctggaattaggttacctaaataagatcggtgtgatacattccaacaaagaacaaaat
cacagatttaacaccgttaagcaatttcacgaaggtaattaccgcattctgattgccaca
gacatcattgcgcgtggattggacgtagccgaagtttctcacgtctttaattttgatatc
ccggaagtccccgaaaactacatccaccggattggccgcacgggccgtgcggacaagaaa
ggcgtggcgatatcattcattacagaaggtgaaaaagaacgtcaggaacagatagaagcc
ctgatgaattacgaaataccgatcgaaactctgccggaaaacctcagaatgtcggagatc
ctgacaccggacgaagagccgcagatttacatgaaaagtattgatgtgaagttgccaaag
agagaagctggcggcggtgcattccacgaaaaaatcgacaagaacaagaaagtgaatgtg
cggagaaaccatgcgcaggaaaaaatgcagaaatatggccgacctatcaaacggtcgggt
aagaaatag
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