Daucus carota (carrot): 108199395
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Entry
108199395 CDS
T05350
Name
(RefSeq) ABC transporter B family member 20
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108199395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcr02000
]
108199395
04147 Exosome [BR:
dcr04147
]
108199395
04090 CD molecules [BR:
dcr04090
]
108199395
Enzymes [BR:
dcr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108199395
Transporters [BR:
dcr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108199395
Exosome [BR:
dcr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108199395
CD molecules [BR:
dcr04090
]
Proteins
108199395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_15
AAA_23
AAA_16
AAA_22
Zeta_toxin
AAA_30
HTH_psq
Motif
Other DBs
NCBI-GeneID:
108199395
NCBI-ProteinID:
XP_017222684
LinkDB
All DBs
Position
8:22261561..22272658
Genome browser
AA seq
1397 aa
AA seq
DB search
MMISRGLFGWSPPHVQPLTPVSEVSEPPESPSPYLETGTDAVAAEVEETDDEEEIEQPPE
AVAFSRLFACADKLDWMLMVVGSVAAAAHGTALVVYLHYFAKIVHLLAHEGDTPDELFDR
FTDLSLTIVYIAGGVFVAGWIEVSCWILTGERQTAVIRSKYVHVLLNQDMTFFDTYGNNG
DIVSQVLNDVLLIQSALSEKVGNYIHNMATFVSGLVIGFINCWQIALITFAAGPFIVAAG
GVSNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGI
LISLVQGLGLGFTYGLAICSCALQLWVGRFLITHKKAHGGEIVAALFAVILSGLGLNQAA
TNFYSFEQGRIAAYRLFEMISRSSSTVNHDGNTIASVQGNIEFRNVYFSYLSRPEIPILS
GFYLTVPAKKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQVG
LVTQEPALLSLSIRDNIAYGRDATLDQIEEAAKTAHAHTFISSLPMGYETQVGRAGLALT
EEQKIKLSVARAVLSNPSILLLDEVTGGLDFEAEKSVQEALDLLMLGRSTIIIARRLSLI
KNADYIAVMDEGQLLEMGTHDELIALDRLYAELLKSEEAAKLPRRMPKQKYKEASAFQIE
KDSSASRSFQEPSSPKMAKSPSLQRGSAIHAIRPPDGTFSPHESPRTQSPPPEQMIENGV
VQDATDKEPSIKRQDSFESKLPDLPKIDVRSAHQQVSSASNPESPVSPLLTSDPHERSHS
QTFSRPPSESDEMSMELNEAKKSEHGKPPSFWRLVELSLAEWLYAVLGSTGAAIFGSFNP
LLAYVIALIVTAYYRNDNHNIRHEVDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTER
VRRMMFSAMLHNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAIIVAV
IIGMILQWRLALVALGTLPILTISAIAQKLWLAGFSKGIQEMHRKASLVLEDAVRNIYTV
VAFCAGDKVMELYRMQLRKIFKQSFFHGMAIGFAFGLSQFLLFACNAALLWFTALSVKRN
YTDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDNASMK
PPNVYGSLELKNVDFSYPTRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTILSLIERFY
DPVAGQVFLDGRDLKLYNLRWLRNHLGVVQQEPIIFSTTIRENIIYARHNASEAEMKEAA
RIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESE
SSRVVQEALDTLVMGNKTTILIAHRAAMMRHVDTIVVLNGGKIIEEGSHDTLMAKNGLYV
RLIQPHYGKGIRQHRII
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgatgatatctcgaggtttgttcgggtggtccccaccgcacgtacagccgttgacgccg
gtttcggaagtgtcggagccgccggaatctccgtcgccgtacttagagaccggcaccgat
gcggtggcggcggaagtggaagagacggatgacgaggaggagatcgagcagccgccggag
gcggtggcgttctcgagattgttcgcgtgtgcggataagcttgattggatgcttatggtt
gttggatcggttgctgcggcagctcacggcacggcgttggttgtgtatttgcattatttt
gcgaagattgttcatttgttggcgcacgaaggcgatacaccggacgagttgtttgatagg
ttcaccgatctttctttgactattgtttatattgctggtggtgttttcgttgctggttgg
attgaggtatcatgttggatacttaccggagaacgtcagactgctgtgataagatcaaaa
tatgttcatgtgttgcttaatcaagacatgacttttttcgatacctatgggaataatgga
gacattgtgagccaagtactaaatgatgtattgctcattcagtctgctcttagtgaaaaa
gtcgggaattacattcataacatggctacctttgtcagtggtcttgtaattggatttatc
aactgctggcagatagcccttattacttttgctgctggcccgttcattgttgcagcagga
ggtgtgtcaaatattttcttgcatagacttgcggagaatattcaggatgcatatgctgaa
gcagcaagtattgcggaacaggctgtctcgtacattagaactttgtatgcattcacaaat
gaaactttagcaaagtattcttatgcaacttctctacaagcgacattaaggtatggaata
ttgataagtcttgtgcaagggcttggactaggattcacttacgggcttgctatttgttct
tgtgccttgcaactttgggtcggaaggtttttgattacacataagaaagctcatggtggc
gaaatagtagcagcattatttgcagtgattttaagtggccttgggctgaatcaagctgct
acaaacttctattcatttgagcaaggtagaatagcagcttacagactttttgagatgatt
agccgctcatcatccacagtcaaccatgatgggaatacaattgcttctgtacaaggaaac
attgagtttcgaaatgtatatttcagctatttgtctcgccctgaaattcccatattgagt
gggttttacctcacagttcctgctaaaaaaactgtcgcacttgttggaagaaatggatct
ggaaaaagcagtatcataccactcatggaacggttctatgatcctacattaggagaagtc
cttttggatggagaaaatatcaagaatctgaaactggaatggctgagaagccaggttggt
ttagtgactcaggagcctgctttgcttagtttgagtatcagagacaatattgcgtacgga
agagatgctaccttggatcagatagaagaagcagctaaaacagcacatgctcatacattt
atcagctcacttccgatgggatatgagacgcaggtgggcagggctggtttggctttgact
gaagaacagaaaatcaaactttctgttgctagggcagtactttcaaatccatcaattctt
cttttagatgaggttactggtggtcttgattttgaagctgaaaaatctgttcaggaggct
ttagatcttctcatgttagggcgatcaactataataatagctcgacgccttagtctgata
aagaatgctgattacattgctgtgatggatgaaggtcaactactcgaaatgggaacacat
gatgagttaatagccctggatcgtttatatgctgaacttttgaaatccgaagaagcagca
aaactgccaagaaggatgccgaagcaaaaatacaaggaagcttcagctttccaaattgag
aaagattcctcagcaagtcgtagctttcaagaaccatcttcacccaagatggctaaatca
ccatctctgcagagaggttctgcaatccatgcaattcgacccccagatggtacatttagc
cctcatgaatcaccaagaactcagagccctcccccagagcaaatgattgagaatggcgtg
gtacaggatgccacggacaaggaaccatctataaagcgacaagatagcttcgaatcgaaa
ctgccagacttgccaaagattgatgttcgttcagcacatcaacaagtatccagtgcatct
aatcccgagtctcctgtttcaccacttttgacatctgatccgcatgagcgttcccattca
caaacctttagtcgaccacctagtgaatctgatgaaatgtcaatggaactgaatgaagca
aaaaagtcagaacatggaaaaccaccatccttttggaggcttgtagagcttagcttagcc
gaatggctttatgctgttttaggaagcactggtgcagccatctttggctcctttaatcct
cttctggcatatgttattgcacttatagtgacggcatattacagaaatgacaaccataat
atacggcatgaagtagacaaatggtgcttaattattgcctgcatgggtattgtaacagtg
gtggccaattttcttcagcacttttactttggtataatgggtgagaaaatgacagagaga
gttaggagaatgatgttttcagcaatgcttcacaatgaagttggatggtttgatgaagag
gagaatagtgccgataccttgtccatgcgcctggcaaatgatgctacatttgttagagct
gcttttagcaaccgcctttccatattcatacaagacagtgcagctattattgtagctgtt
ataattggtatgatacttcagtggcgattggctcttgttgctctgggtactctgccgatt
cttactatttcggctattgcacagaaattgtggcttgctggattctctaaaggcatacag
gaaatgcatagaaaggcctcactggtactggaagatgcagtcagaaatatctacactgtt
gtggcattttgtgctggtgacaaggtaatggaactttaccggatgcagctaaggaaaata
ttcaaacagagcttctttcatgggatggctattggatttgcttttgggctttcacagttt
ctcctttttgcctgcaatgctgctcttctatggttcacagcactttctgttaaaagaaat
tacacggatcttccaacggctctcaaggaatacatggttttctcttttgctacattcgcg
cttgtagaaccttttggcttggctccatatatacttaaaagacgaaagtctttgatatcc
gtatttgaaataattgatcgagttcctaagatagacccagacgataatgcatcgatgaaa
cctccaaatgtctatggaagcctcgaattgaagaatgttgatttttcttatcccactcga
ccagaagttctggtgttgagtaatttcagcctcaaagtaaatggcgggcaaacagttgca
gtggttggagtttcaggatctggaaagagtacaatactttctttaattgaaagattttat
gatccagttgctggtcaggtttttttagatggtcgagatttaaagttatacaacttgaga
tggttgaggaatcatcttggtgttgttcaacaagaaccgattatcttttcaacaacaatt
agggaaaatatcatatatgcgaggcacaatgccagtgaagctgagatgaaagaagctgcc
agaatagccaatgctcatcatttcatcagcagtttacctcatggttatgacactcatgtt
ggaatgaggggtgtggatctaactcctggacagaaacaaagaattgcaattgctcgtgta
gtgttgaagaatgctcccattttgttactggatgaggcgagctcgtcgattgagtctgag
tcaagccgagtggtccaagaggctcttgatacgttagtcatggggaacaaaacaactatt
ctgattgcccatagagctgcaatgatgagacatgttgacaccattgttgtactcaatgga
ggaaagattatcgaggaaggaagccatgacacattgatggcaaagaatgggttgtatgtt
cggttgattcaacctcattatgggaagggaatccgtcagcataggatcatctag
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integrated database retrieval system
