Daucus carota (carrot): 108199595
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Entry
108199595 CDS
T05350
Name
(RefSeq) heat shock cognate 70 kDa protein
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03040
Spliceosome
dcr04141
Protein processing in endoplasmic reticulum
dcr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108199595
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108199595
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108199595
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcr01009
]
108199595
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108199595
03009 Ribosome biogenesis [BR:
dcr03009
]
108199595
03110 Chaperones and folding catalysts [BR:
dcr03110
]
108199595
04131 Membrane trafficking [BR:
dcr04131
]
108199595
03051 Proteasome [BR:
dcr03051
]
108199595
03029 Mitochondrial biogenesis [BR:
dcr03029
]
108199595
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dcr04147
]
108199595
Protein phosphatases and associated proteins [BR:
dcr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
108199595
Spliceosome [BR:
dcr03041
]
Complex B
Other components
Prp19 complex
108199595
Complex C
Prp19-CDC5 complex
108199595
Ribosome biogenesis [BR:
dcr03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108199595
Chaperones and folding catalysts [BR:
dcr03110
]
Heat shock proteins
HSP70 / DNAK
108199595
Membrane trafficking [BR:
dcr04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
108199595
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
108199595
Proteasome [BR:
dcr03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
108199595
Mitochondrial biogenesis [BR:
dcr03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
108199595
Exosome [BR:
dcr04147
]
Exosomal proteins
Proteins found in most exosomes
108199595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
PilM_2
SWI-SNF_Ssr4_C
DUF5646
Motif
Other DBs
NCBI-GeneID:
108199595
NCBI-ProteinID:
XP_017222983
LinkDB
All DBs
Position
8:22520515..22523736
Genome browser
AA seq
613 aa
AA seq
DB search
MARGEEPVIGIDLGTMYSCVGVFQNGHVKIIASEHGGRKTPSCVAFTDTERLIGEAVIDQ
AGMNAANTVFNAKQLIGRKFSDLSVQRDIKNWQCKVFSGPLEKPMILVNYKGEEKQFSAE
EICSMVLVRMKEIAEKHLGTTVRNAVITVPAYYNDSQRQAIRDAGTIAGLKVMRTIAEPT
AAAVAYGFDKKLAGIVSSDGEKNVLIFDLGASNCNVSLLTMEDGIFEVKATHGASQFGGE
DFVNRMVNHFVEEFRRKNNKDISGNAKCMRRLKKECEKAKRLLSSVPVTNIYLDYFYYDD
SFSANITRDDFNELNKDLFESCVELVKKCLRDARIDKRHIHEVVPVGGSSRIPKVQQLLK
EFFNGKELSMGLNTDEGVAYGATVQAAVLSGRGDERFQDLMLLDVNPLSLGIDINGEMSV
IIPKNYNIPAKKFKIFPTTTDNQVAVFIQVFEGEHKLTKHNKLLGKFVFSGIPPAPSGVS
KYIVYFDIDADGLFNVSAENENSEPLEEIKVPTYEDRFSKEELKKLVQEAKKYKADDEEN
KKKMEARIAVESYFYNLKNIISDERLSSRFGVASRKKMKDAIDIENLWSNGNQFVKLENL
EEIIKELKGLAIF
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggccagaggagaagagcctgtgatcggaatcgatctcggaaccatgtactcatgtgtt
ggagtttttcaaaacggtcatgtaaagataattgccagtgagcatggtgggaggaagaca
ccatcttgtgtggctttcactgatactgagaggcttattggcgaagctgtaattgaccag
gctgggatgaatgctgctaacactgtctttaatgctaaacagctgataggcagaaaattc
agcgacttgtctgtacagcgcgatataaaaaactggcagtgtaaagtgttctcaggtcct
ttggaaaagcccatgattttggtcaattacaaaggtgaggagaagcagttctcggcagaa
gagatctgctccatggttctcgtaaggatgaaggaaattgcggagaagcatcttggaaca
acagtaagaaatgctgttatcactgtccctgcttactataatgactctcagcgccaagca
attagagatgctggaaccattgctggcctgaaagtaatgcgcacaattgctgagccaact
gcagctgcagttgcttatggttttgacaagaagctggcaggaatcgttagttcagacggg
gaaaagaatgtgctcatctttgatcttggtgctagtaactgtaacgtgtctcttcttaca
atggaagatggtatattcgaagtgaaggctacacatggtgcgagtcagtttggaggggag
gattttgttaatcgtatggtcaatcactttgttgaggagttcagaaggaaaaacaataag
gacataagtggtaatgcgaaatgtatgagaagattgaaaaaagaatgtgagaaggcaaaa
aggttgctctcctctgtcccagtgaccaacatttatttggattatttttactacgatgac
agtttctctgcaaatataactcgtgatgatttcaatgagttaaacaaagatctgtttgaa
agttgtgtggagctggtcaagaagtgtttgagggatgcgcggattgataaaagacacatc
catgaggtggtccctgtaggtggatcttctagaattcctaaagtgcagcagttactgaaa
gagtttttcaatgggaaggagctgtccatgggtttaaataccgatgagggtgttgcatat
ggcgcaactgtccaggctgcggttctgagtggcagaggcgacgagaggtttcaagacttg
atgctgttggatgttaatcccttatcccttggaattgatattaatggtgaaatgtctgtc
attattcctaagaactataacattcccgctaaaaagtttaagatttttccaaccactact
gacaatcaggttgccgtgttcatccaagtgtttgagggtgaacacaaattgacaaaacat
aacaaactgttgggaaaatttgtattctctggcattcctcctgcgcctagtggtgtttca
aagtacatagtgtactttgatatcgatgcagatggattgttcaatgtttctgcagaaaat
gagaattcagagccgttggaggagataaaagtgccaacttacgaggatagattttcaaaa
gaagagcttaagaagttggtacaagaagctaagaagtacaaagcagacgatgaagagaac
aaaaagaagatggaggcaagaattgctgtagagtcttacttctataacttgaagaacatc
atcagtgacgagagactaagttccagatttggggtagccagcaggaagaaaatgaaggat
gctattgatatcgaaaacctgtggtcaaatgggaaccagtttgtaaagttggagaacttg
gaggaaattattaaggagctcaagggactcgcaatattttaa
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