Daucus carota (carrot): 108200372
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Entry
108200372 CDS
T05350
Name
(RefSeq) protein transport protein SEC23 G
KO
K14006
protein transport protein SEC23
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108200372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108200372
Membrane trafficking [BR:
dcr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
108200372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
zinc_ribbon_10
Motif
Other DBs
NCBI-GeneID:
108200372
NCBI-ProteinID:
XP_017223985
UniProt:
A0A175YHW5
LinkDB
All DBs
Position
9:41463060..41467091
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AA seq
789 aa
AA seq
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MDFIELEAMEGLRWAWNSWPVSKSESNALVVPLSIMCTPLMQFNELPLLPYDPLVCNQCG
AILNPYARVDYQSRIWVCPFCYKKNVFPRSYVGIGEDNIPAELFPTYSTVEYQLGSKGNL
NLSHNWGSGSDVGLNQSNSLGSMNGSYSSGSLSGMDGRGGGGGVGTGPAFVFVLDGCSGE
EELRALRNEILLVISQLPDNVLVGLIVFDSFVRVYDLGFTECLRVVLFNGERQVSSDETK
QLLGIQNIKQQLGRPHATERQGFLLPLSECEFSLTAAIDDIRSLTHTMRAYRPQRCTGAA
ISVAVGLLEGCLVTTGSRIMVFTSGPATIGPGMIVNSDFVNAIRNHRDVDSGHATLYRKS
CDFYKQISARLLASSIVLDLFACSLDQVGAAELRVPVERSGGFMMLGESFESDQFRKCLR
HIFRHDDDGSLKMCFDATIDIVTTKDLKICGALGPCVSLQKKNGSVSDKEIGEGGTHMWK
LGTLDNRTCIAFFFQVGSEQMPQPSSAFFIQFITCYRHGNMGIRKRVTTVARRWVGSQSA
DIDAGFDQEAAASVMARLAVQEAEKRYYPDVIRWLDTMLIRFASKFGDYVAEDPSSFRLA
SNFSLFPQFMYYLRRSQFIDVFNCSPDETAFFRLMLNREGVVGSVIMIQPTLFQYSFDGP
PVPVLLDVCSISPDVILLFDSYFCVVIHYGSKIAQWKKLGYDKDPNHESFRKLLEAPEID
AEQLVADRFPVPKLVKCDQHSSQARFLLAKLNPSVTQNSTYSDGRELILTDDVSLQDFIE
HLQTLAVQG
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggatttcatcgaattagaagccatggaaggcctaagatgggcttggaattcatggcca
gtgtcaaaatctgaatctaatgctctagttgttccattgtcaatcatgtgtactccattg
atgcaattcaatgagctccctttgcttccttatgaccctcttgtttgtaatcaatgtggt
gccattttgaacccttatgcgcgtgttgattatcaaagtaggatttgggtgtgcccattt
tgttataaaaagaatgtctttcctaggtcttatgttggtataggggaggataatatccca
gctgagctttttccgacgtatagtactgttgaatatcagttgggtagtaagggaaatttg
aatttgagtcataattggggtagtgggagtgatgtggggttgaatcagtcgaattctttg
ggttcgatgaatggttcgtattcgtctggttcgttgtcgggcatggatgggagagggggt
ggtggtggggttgggactgggccagcatttgtgtttgttttggatggatgttcgggtgaa
gaggagcttagggcgcttaggaatgagatattgcttgtgatttctcagttgccggataat
gtgttggtggggttgattgtgtttgattcttttgttcgagtttatgatcttgggttcaca
gagtgtttaagagttgttttgtttaatggagagcgccaggtctcttctgatgagactaaa
caattgcttgggatccagaacattaagcaacaacttggaaggccacatgctactgaaaga
caggggtttctgttaccattatctgaatgtgagttcagtctcactgcagccattgatgat
atccgttctttaacacataccatgcgagcttatcgtcctcagcgctgcacaggcgctgca
atatcagttgcagtcggacttctagaaggatgcttagtcaccacaggttctcgtattatg
gttttcacatctggtcctgcaactataggcccaggaatgattgttaactcggattttgta
aatgccattagaaatcaccgagatgtggatagcggtcatgcgaccttgtatagaaagtcg
tgtgatttctacaaacagatatcagcaaggttgttagcttcatctattgttcttgatctg
tttgcttgttctcttgatcaagtaggagcagcagagctaagagttcctgttgagagatca
ggtggatttatgatgttaggtgagtcatttgagtctgatcaatttagaaaatgcctccgt
cacatttttagacatgacgatgatgggagcttaaaaatgtgttttgatgcaactattgat
atagtaaccacaaaagatttgaaaatttgtggagccctcggtccttgtgtttctctgcag
aagaagaatggatcagtaagtgataaagaaattggtgagggtggtactcacatgtggaaa
ttaggtacacttgataatagaacatgtatagcattcttcttccaagtgggtagtgaacag
atgccccaaccaagttctgcattctttatacagtttattacatgttaccgacatggaaac
atgggaattcggaagcgggtgacaactgtagcaagaaggtgggttgggagccaatcagca
gacattgatgctgggttcgatcaagaagcagcagcttcagtaatggctagacttgctgtc
caggaggctgagaaaaggtactatccagatgttattaggtggttggatacgatgttaatt
cgttttgcctccaagtttggtgattatgtggctgaagatccatcttcgtttcgtcttgca
tccaacttttctctcttcccacagttcatgtattacctaagaaggtcccaatttatcgat
gtctttaactgtagccctgatgagactgcttttttccggttaatgttaaaccgtgagggg
gtggttggttctgttataatgatccaacctacactttttcagtactcatttgatgggcct
cctgttcctgtgctcctagatgtttgttccatctctcctgatgttatattgctctttgat
tcctatttctgtgttgtcattcattatgggtctaagattgcacaatggaagaaacttggt
tatgacaaggacccaaaccatgaaagtttcagaaagctgctagaagccccagaaattgat
gcagagcaactagtagctgacaggttcccagttccaaaacttgtaaaatgtgaccagcac
agtagtcaggcaagatttcttcttgctaaattaaatccttctgttacacagaactcgacc
tactctgatgggcgggagttaatattgactgatgatgttagcttacaggattttatagaa
cacttgcaaactcttgctgtgcagggctga
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