KEGG   Daucus carota (carrot): 108202981
Entry
108202981         CDS       T05350                                 
Name
(RefSeq) DNA repair protein REV1 isoform X1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
dcr  Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dcr03400]
    108202981
DNA repair and recombination proteins [BR:dcr03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    108202981
SSDB
Motif
Pfam: IMS IMS_C BRCT BRCT_2 IMS_HHH POLH-Rev1_HhH PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 108202981
NCBI-ProteinID: XP_017227146
LinkDB
Position
9:complement(1875083..1891704)
AA seq 1139 aa
MSSRSKRALSSNASTKSTNKKNKTNQKTLGVAWSAAGSRASTFKSSPFSDTASYMAVKNQ
KLHEQFDAAASTTFQGELSSGKPIFHGVSIFVDGFTIPSSQELRGYMLKHGGRFENYFSR
HRVTHIICSNLPDSKIKNLRSFSAGLPVLKPTWVLDSVAANKLLSWHSYQLDQIATETQG
QPKLSAFFPLKRSPFSCNYATNAIGQPLSKIEDQTPKLDAVVTNNSFGEGETRKETEQCD
VLSDIQLKVDSAVNKNSYGESQFLEEITHANIETDIPLNESLIKAKDEEIGCNDVKLCEP
STSEPGDATSDSILAENELKFISPGEPSTSHSTYSTDKHNISESSNSRIVMSSSHSTLED
PNFVENYFKHSRLHFIGTWRNRYRKLFPATYSGTKGTNSSLHTRLTDEQATVIHVDMDCF
FVSVVIRNNPELQNKPVAVCHSDNPRGTAEISSANYPARAYGVRAGIFVRDAKSMCPDLV
IVPYNFEAYEEVADQFYGILHKHCNKVQAVSCDEAFLDVSDSKIEDHQCLASIIRKEVFD
TTGCKASVGIAGNMLMARLATRNAKPDGQCYIPADKVEEYLNELPIKALPGIGHVLEDKL
KRREVKTCKQLRLISKESLQKEFGLKTGDMLWNYSRGIDNRSVGAFQESKSIGAEVNWGV
RFNNLEHCQYFLLNLCKEVSLRLQGAGVQGRTFTLKVKKRKTDAGDPVKYMGCGDCENLS
HSLTVPMATDDVDGLHRIAIKLFDLFHIDVKEIRGMGLQVSKLENADSGHQGNQKNFLRS
WLISASSTNRDQCEVKSIAEGSCERENQNADGNLGQQSCTNMIVGSDILSSEGHVNRDSV
LPPLCDLDMGVIENLPPDVFSELNNRYSGKLISFMSKRKGKLAESNIGGMASEERGTSVP
SVVPLRPCKAEKTSTVKEVSVTAASGMVAGNNGSSFSRNIDVMPYSLSQIDVSVLHQLPE
EMKAEFLELLPAHRKQECNSDPVPAESCPQQSSDSEYTHNLSGSRGSISANEYWLGNPPK
WVENFKMSSCLVLNIFADNYYKSGSAGKLSSILQRARSNFVPSLGLTPDGLDDAILCLCN
LFKQYIEVKIETDIEEIYLCFRLLKRLSKKSTFFLEAYNVILPEIQATVGEKYGGNFLA
NT seq 3420 nt   +upstreamnt  +downstreamnt
atgagctcgagatcgaaacgagccctaagctcaaacgcatcgactaaatcaaccaacaag
aagaacaaaacgaaccagaaaaccctaggcgtggcttggagcgccgccggttctcgcgct
tcgacgttcaagtcgtctccgttctccgataccgcaagttacatggcagttaagaatcag
aagctacatgaacagtttgatgctgccgcttccaccacctttcaaggagaattgtcttca
ggaaaacctatatttcacggggtatcaatttttgttgatggattcacgattccttccagt
caggagctaagaggttacatgttgaaacatggcgggcgtttcgaaaattatttttcacgg
catcgtgttactcacataatctgcagtaaccttcctgacagtaaaattaagaatttgagg
tctttcagtgctggacttcctgtactgaaaccaacatgggtcttagattctgttgctgct
aacaaactcttgagttggcactcttaccaacttgaccagattgctactgaaactcaggga
caaccaaaattgtctgcattctttcccctgaaaaggagcccattctcatgtaactatgct
actaatgcgatcggtcagccactatctaagattgaggatcaaactcctaagctagatgca
gtggtgaccaacaactcttttggagaaggtgaaaccagaaaagagacagaacagtgcgac
gtattatctgacattcaactgaaggtagattcagcagtgaataagaactcatatggggaa
agtcaattcctagaggagataacacatgcaaacatagaaactgacatcccattgaatgag
agtctcatcaaagcaaaagatgaggagataggatgtaatgatgtaaaactttgtgaacct
agcacatctgaaccaggtgatgctacatcagacagtattcttgctgaaaatgaactcaaa
tttatcagtcctggtgagccttctacttctcatagcacttactccacggacaagcataat
attagcgaatcctcaaattcaaggattgttatgagctcaagtcattctactcttgaggac
cctaatttcgtggaaaattattttaagcattcaaggttgcactttattggaacatggagg
aatcgctaccgcaagctttttcctgccacatattccggaactaaaggcacaaattccagt
ctccatacccgcttgactgatgaacaggcaactgttattcacgtagatatggattgcttc
tttgtttcggtcgttataaggaacaatcctgaattacaaaataagcctgttgctgtttgt
cactctgacaatcctcgtggaactgctgaaatttcatcagcaaattatcctgccagagct
tatggggttagggcaggaatttttgttagggatgcaaaatccatgtgcccagaccttgtc
atagttccatataattttgaagcatatgaagaggtcgctgatcaattctatggcatactg
cataagcactgcaacaaagtgcaggctgttagttgtgatgaagcattcttagatgtctcc
gattctaagatagaggatcatcagtgtttagcttcgataataaggaaggaggtatttgat
actactggttgcaaagcaagtgttggcattgctgggaatatgctcatggcgcgccttgca
actagaaatgctaaaccagacggtcagtgctacattcctgctgataaggtggaagagtat
ttaaatgaacttccaattaaagcacttccaggaattgggcatgtcctagaggataaactg
aaaaggagagaagtaaaaacatgcaaacaactgcgtctgatttccaaggaatctcttcaa
aaggaatttggtttaaaaactggtgacatgctttggaattatagcagaggaatagacaat
cggtctgttggagcgtttcaggaaagcaagtctataggtgctgaagtaaactggggagtg
aggttcaataatttagaacattgccaatattttctcctaaacctttgcaaagaggtctct
ttgcgtttgcaaggagctggagtgcaaggccgcactttcactcttaaggtaaagaagaga
aaaactgatgctggagacccagtgaaatatatgggctgtggggattgtgaaaaccttagt
cattcattaacggttcctatggctactgatgacgtagatggcctgcacaggatagcaata
aagctgtttgatttatttcacatagatgtgaaggagatccgggggatggggttgcaagtt
tcgaaacttgaaaatgcagacagtggtcatcaagggaaccaaaagaattttttacgttct
tggctcatctctgcatccagcactaacagagatcaatgtgaagttaaatctatagcagaa
ggcagttgtgaaagagagaatcagaatgcagatggaaatttggggcagcagtcgtgcaca
aatatgattgtgggtagtgatattttgagcagtgaaggtcatgtcaaccgagactctgtt
ctccctcctttatgtgatcttgatatgggggtgatagagaatctacctcctgatgtattc
tctgaacttaacaaccggtatagtggaaaactaatttcatttatgtcaaagcgtaaaggc
aaacttgctgaaagcaacattggagggatggcatcagaggaaaggggaactagtgttcct
tctgtggtccctttgagaccatgcaaggcagagaaaacgagtacagttaaggaagtctcg
gtaacagctgcttctgggatggtagcgggaaataatggttcttccttctctagaaatatt
gatgtaatgccttactctctaagccaaattgatgtttcggttctgcatcaactgcctgag
gaaatgaaagcggaatttcttgagcttcttcctgcacacaggaagcaagaatgtaattct
gatcctgttcctgccgagtcctgtcctcagcagtcatctgattcagagtatactcataat
ttgtccggctcgaggggatctatttcagccaatgagtattggcttgggaatccaccgaaa
tgggttgaaaatttcaaaatgagcagttgtttggttttaaatatttttgcagataattat
tacaaatcaggttcagcagggaaattatcttcaatactacaacgagctaggtctaatttt
gttccgagccttggtttaactcctgatggtctggatgatgctatactttgcttgtgtaat
ctattcaagcagtatattgaagtaaagatagaaacagatattgaagagatctatctctgt
tttcggcttctaaaaaggttatcgaaaaagtcaacattctttttagaagcatataacgtc
attcttcctgaaattcaggcaactgtcggtgaaaagtatggtggaaatttccttgcttaa

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