KEGG   Daucus carota (carrot): 108204434
Entry
108204434         CDS       T05350                                 
Name
(RefSeq) uncharacterized protein LOC108204434
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108204434
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dcr03041]
    108204434
Spliceosome [BR:dcr03041]
 Complex A
  U2 snRNP components
   U2 related factors
    108204434
 Complex B
    108204434
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    108204434
SSDB
Motif
Pfam: SMN_Tudor Agenet CENP-C_mid MAT1 TUDOR
Other DBs
NCBI-GeneID: 108204434
NCBI-ProteinID: XP_017229352
LinkDB
Position
1:complement(25962012..25968858)
AA seq 306 aa
MEGDGDEISVHELVSNLSNYKQQLQQVRSLLDDDPGNSEYEDMEKELAEVIALTEELLES
AKQNEKSGMITGTGSDVSHSLHHPEGVSPHYLESGLMSDQSDRLPIGTKVQAVYSEDGEW
YDATIDAFTPNGYLVSYEGWGNKEEVDPANIRPLQEGAVDTILEAEKEAEATKLALKRKI
AQAASADTDLQSRSLPAKLRIEPEDSEDVKAAKRKKIHAFKSKMRKEQLEMTQNKRQNAW
QQFQTTKGRAKKIGFFSGRKRESIFKSPDDPFGKVGVIGSGKGLTDFQKREKHLHLKGAN
ADGTDE
NT seq 921 nt   +upstreamnt  +downstreamnt
atggaaggagacggtgatgaaattagcgtacacgaactcgtctccaatctctctaattac
aaacaacagcttcaacaggttaggagcctcttggatgatgatcctgggaactctgaatat
gaagacatggaaaaagagcttgcagaggtaattgctttgacggaagaactcttggaatct
gcaaagcaaaatgagaaatcaggcatgattactggaacaggttctgatgtatctcatagt
ttgcaccatcctgaaggagtctctccacattacctggaatcaggtctcatgtctgatcag
tctgacagactccctattggcaccaaagttcaagcagtttatagtgaagatggggagtgg
tatgatgcaacgattgatgcatttacaccaaacggctatctggtgtcatatgagggatgg
ggcaataaggaagaggtggatcctgcaaatattaggccgttgcaagaaggggctgtagat
acaattttagaagctgagaaggaagctgaggctacaaaacttgctctcaagcggaaaatt
gctcaggctgcttctgctgatactgacctccagtcccgtagtttaccagcaaagctacgt
attgagcctgaggacagtgaagatgtgaaagctgccaaacgtaagaagatacatgctttc
aagtcaaagatgcggaaggagcaacttgagatgacacagaataagaggcagaatgcatgg
cagcaatttcagaccaccaaaggccgagctaagaagattggttttttctctggtcgcaaa
cgtgagagcatttttaaatctccggatgacccttttggaaaggttggtgtaattggaagc
ggaaaaggattgacggactttcagaaaagggaaaagcacttgcatctgaaaggagcaaat
gctgatggcacagatgaatag

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