Daucus carota (carrot): 108204698
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Entry
108204698 CDS
T05350
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108204698
Membrane trafficking [BR:
dcr04131
]
Protein recycling
Others
EARP complex
108204698
Endosome - Golgi transport
Tethering complex
GARP complex
108204698
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
RINT1_TIP1
COG7
XhlA
MPH2
Mo25
Motif
Other DBs
NCBI-GeneID:
108204698
NCBI-ProteinID:
XP_017229751
LinkDB
All DBs
Position
1:41082734..41097848
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AA seq
821 aa
AA seq
DB search
MDKSNALDYINQMFPTEASLSGVEPLMQKIHNEIRRVDAGILAAVRQQSNSGTKAKEDLA
AATGAVKELMYKIHEIKTKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSA
VEKLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDIPKITELREKLKNIKQILKSHVSSD
FSSLGTGKETEETNLLQQLSDACLVVDALEPSVREDLVKNFCSRELTSYRQIFEGAELAK
LDKTERRYAWIKRRLRTNEEIWKIFPPSWHVEYLLCIQFCKLTRTQLDEILSNMKEKPDV
GNLLLALQRTKEFEDELADKFGGGSPSKDIGSDNGETDSGENTTQTVLDIRKKYEKKLAS
HDEKDGQKDLSVPGAGFNFQGIISSCFEPHMTVYIELEEKTLMEHLEKLVQEETWEIEEG
SQTNILSSSMQVFLIIRRSLKRCSALTKSQTLLNLFKVFQRILKSYATKLFARLPKGGTG
IVAAATGMDGQIKTSDKDERVICYIVNTAEYCHKTAGELAENVAKIIDSQLADAVDMSEV
QDEFSAVITKALVTLVHGLESKFDIEMAAMTRVPWATLESVGDQSEYVNGINLILISSIP
ALGSLLSPIYFQFFLDKLASCLGPHFYQNIFKCKQISETGAQQMLLDTQAVKTILLDIPS
LARQTSGAASYTKYISREMSKAEALLKVILSPVDSVADTYRALLPEGTPLEFQRILDLKG
LKKTDQQNILDDINKRGPVITQPPPLAATSIVPAVPSVPSPPASIASTTSGIISAASRED
VLTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNP
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtctaatgccttggattatatcaatcagatgttcccaactgaggcatcatta
tctggagtcgagcctttaatgcaaaaaattcacaatgagattcgccgtgtagatgccgga
attttagcagctgttcgccaacagagcaattcgggaacaaaagccaaggaagatcttgct
gcagctacaggtgctgtgaaggaactgatgtacaagattcatgaaataaaaactaaagcc
gagcaaagtgaaacaatggtacaggagatatgtcgcgacattaagaaattggattttgca
aagaagcatataactactacaatcacagcacttcatcgtcttacaatgctagtctccgca
gttgagaaacttcaagtaatggcttcaaaacgccaatataaagaggcagctgcacaactt
gaggctgtgaaccagttatgtagtcattttgaagcctatcgagatatcccaaagatcacg
gagctgagggagaaattgaagaacattaaacaaattctgaaatcacacgtgtcctctgat
ttttcaagcctaggcacaggaaaagaaactgaagaaactaatttgctgcagcagctatca
gatgcttgtttggttgttgatgctctggagccatcagttagagaagatctggttaagaac
ttttgtagccgtgagcttacttcatatcgacagatctttgaaggagctgaattagccaag
ctggataaaactgagcgaagatatgcttggataaaacgtcgtttaagaacgaatgaggag
atatggaaaatctttcctccttcatggcacgttgagtatttgctctgtattcagttctgc
aagttgacgaggacacaacttgacgaaatcttaagtaatatgaaagaaaagcctgatgtt
ggaaatttgttgctcgcactacaacgtaccaaagaatttgaggatgaattagcagacaaa
ttcggtggtggcagcccaagtaaagatattgggagtgacaatggggagacagatagcgga
gaaaatactactcaaactgtgttggatattcgaaagaagtacgagaagaagcttgctagt
catgatgagaaagatgggcagaaagatttgtcagtgcctggagctgggtttaattttcaa
gggattatttcatcttgctttgaaccgcacatgacagtatatatagaactggaagagaag
actcttatggaacatctagagaaacttgttcaggaggaaacatgggaaattgaggaggga
agtcagactaatatactgtccagcagcatgcaggtctttttgattatcaggagaagctta
aaaagatgcagtgctttaacaaagagccagactttactcaatttgttcaaggtatttcaa
agaattctcaaatcatatgctacaaaactgtttgcacgattgcctaaaggtggtacagga
attgttgcagctgcaacgggcatggatggtcagatcaagacatctgataaggacgaaagg
gtcatatgttatattgtaaatacggctgaatattgccacaaaacggcaggggagttggct
gagaatgtagccaaaataattgattctcaattggctgatgcagtggatatgtctgaagtg
caggatgaattctccgcagtaataacaaaagctctggtgactttagtacatggtctcgaa
tccaaatttgacattgaaatggctgcaatgacgcgtgtgccatgggcaacccttgagagt
gttggtgaccaatcagagtatgtaaatggaattaatttgatccttataagcagcattcct
gcactcggaagccttctttctcctatttatttccagtttttcttggacaagcttgcatct
tgtcttggtccacacttttaccagaatatttttaagtgcaagcaaatatcagaaactgga
gcgcagcagatgttgttggatacacaggctgtgaaaacaattcttctagatattccctcc
cttgcaagacagacatcaggagctgctagctatacaaaatatatcagtcgtgaaatgagc
aaagcggaggcattgctaaaggttatactgtccccagttgattcagtggcagatacctat
cgagcactgctaccagagggtacacctttggagtttcaacgtatattagatcttaagggt
ctgaagaagactgatcagcagaacatactagatgatatcaacaaacgtggacctgtaatt
actcagcctccacctcttgccgctacatcaatcgttccagctgtccccagcgtgccttca
cctcctgcctcgattgcttcaactacttctggaatcatatcagcagcatcgcgagaggat
gtcttgacgagagcagctgcactgggaagaggtgcggccactacaggatttaagaggttt
cttgctttgacggaggctgcaaaagaccgaaaagacggaccatttaggaagctctttaat
ccatga
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