Daucus carota (carrot): 108205335
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Entry
108205335 CDS
T05350
Name
(RefSeq) heat shock factor protein HSF30
KO
K09419
heat shock transcription factor, other eukaryote
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcr03000
]
108205335
Transcription factors [BR:
dcr03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
108205335
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GFIT
Motif
Pfam:
HSF_DNA-bind
Snapin_Pallidin
RRG8
Motif
Other DBs
NCBI-GeneID:
108205335
NCBI-ProteinID:
XP_017230754
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Position
1:complement(52785968..52788560)
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AA seq
373 aa
AA seq
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MENFKNKAEEMEVKVKEEAVMLHGNQSAPAPASSSSSSSTPQPMEGLHEVGPPPFLIKIF
DMVEDPNTDDVVSWSQARNSFIVWDSHTFCVSMLPKFFKHNNFSSFVRQLNTYGFRKVDP
DRWEFAHEGFLGGQKHLLKTIKRRRNVSQGMQPKGGGPCVELGHYGIDGEFERLRRDRNM
LMAEVVKLRQQQQDSKNLIIAMDNRIQATEAKQQSMMNFLAMAIRNPLFLQQYMEKHGVD
PKKIEIGRKRRLTLSPSVDNLENQISDYTSQQQEAASNAETEMESFLSAAEDNESSDNIR
VPKVPTDDEYLDAFNENMWEELLGDDLRIGNKDEAIASDQPRVEVDNLAKSLSWDIDGLK
DLVDQLEYLRSDP
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttcaagaataaagcagaagaaatggaagtgaaggtgaaagaagaagctgta
atgttacatggtaatcaatctgctcctgctcctgcatcttcttcatcatcttcttcaaca
ccacagccaatggaagggctacatgaagtgggcccacctccatttttgatcaagattttc
gacatggtggaggaccctaatactgatgatgtggtttcttggagtcaagcaaggaatagc
ttcattgtttgggactctcacacattttgtgtctccatgcttcctaaattcttcaagcat
aataatttttctagctttgtgcgccagctcaatacttatggtttcagaaaagtggatcct
gatagatgggaatttgcacatgagggtttcctgggagggcagaagcatctcctgaagacg
ataaagaggagaaggaatgtatcacaggggatgcaaccaaaaggaggaggaccttgtgtc
gaattaggccattatgggattgatggggagtttgaaagattaaggagggataggaacatg
ttgatggcagaagttgtaaagctccgccaacagcagcaggattccaagaatctaattatt
gcgatggataataggatccaggcgacagaagctaagcaacaaagtatgatgaatttcctt
gccatggctatccgcaatcctctattcctccagcaatatatggagaagcatggagtggat
ccaaaaaaaattgagattggaaggaaaagaaggttgacgctaagccctagtgtggacaat
cttgagaaccaaatttcggattatacaagtcagcagcaagaagcggccagtaatgctgaa
actgaaatggagtcattcttgtcagctgcagaggataacgagtcaagtgataatatcagg
gtcccaaaggtacctacggatgatgagtacttggatgccttcaatgaaaatatgtgggag
gaattacttggtgatgatcttagaattgggaacaaagatgaagctatagcaagtgatcag
cctagagtggaagttgacaatctagcaaaatcattgagttgggatattgatgggctaaaa
gaccttgttgatcagttggaatatctcaggtcggatccgtga
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