KEGG   Daucus carota (carrot): 108208906
Entry
108208906         CDS       T05350                                 
Name
(RefSeq) lysine-specific demethylase JMJ17 isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
dcr  Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:dcr01009]
    108208906
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dcr03036]
    108208906
Enzymes [BR:dcr01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     108208906
Protein phosphatases and associated proteins [BR:dcr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108208906
Chromosome and associated proteins [BR:dcr03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    108208906
SSDB
Motif
Pfam: JmjC PLU-1 JmjN PHD zf-C5HC2 ARID KDM5_C-hel Lipoprotein_7
Other DBs
NCBI-GeneID: 108208906
NCBI-ProteinID: XP_017234993
LinkDB
Position
2:43982671..44006068
AA seq 1844 aa
MGKGRPRSVEKGGLGQNSSLGLVNSICIPSAPVYYPTEDEFKDPLEFIYKIRPEAERFGI
CKIVPPESWKPPFALDLEKFMFPTKTQAIHRLQVRAASCDSKTFELEYSRFLEGSGGKKA
KKRVVFEGEDLDLCKLFNAVKRFGGYDRVVKEKKWGEVSKFVRSVRKVSECAKHVLCQLY
REHLYDYEVYYSELNRVAEKSGVRDERKCEPEVDMLSSKRKGKNQGDGGVELVKVEEGEL
DQICEQCRSGLHGEVMLLCDRCNKGWHIYCLSPPLKQIPAGNWYCLDCLNSEKECFGFVP
GRHISLEAFRRVADRAKKRWFGSGPTSRVQLEKKFWEIVEGSAGPVEVKYGSDLDTSVYG
SGFPRVSDQKPEALGEDVWDEYRASPWNLNNLPKLQGSMLRTVHHSIAGVMVPWLYIGML
FSSFCWHFEDHCFYSMNYHHWGEPKCWYSVPGSEASAFEKVMRNSLPDLFDAQPDLLFQL
VTMLNPSVLQNSNVPVYSVLQEPGNFVITFPRSYHGGFNCGLNCAEAVNFAPADWLPHGG
SGADLYKLYRKSPVLSHEELICVVAKTEFDSKVTPYLMKELLRIYNKEKSWRARLWRNGI
VRSSLMSPREQPQYVGVEEDPTCIICQQYLYLSAVACRCRPSTFVCLEHWKHLCECKANK
HRLLYRHSLAELNNLILNVAGRGDYTEATQDKNLQKQQLYSLDIGTLSKKVGSVHVNLVQ
LAEEWLSRSCKLLQMPYSIVAFANALKEAEQFLWGGSEMDSVREATKNLIEAQNWVEGVK
DCVDKVELRLCHGNNDMDRVHMKHVRGLLNIDSVPCNEPEFLKLKEYAEEAEVLIQDIES
ALSMCPQVSIVDWEILHSRAFALGIFVEESEKLSNKLSFVKIWVEGVRKCIMEKSPAAIE
VDSLDKLKSEVSELQIQLPEIEMLGDLMRRVESCQSRCNKILDGSVNLKQLELFLQEMDG
FTVNVPELKLLRQYQKDAVLWISRFQIAVQNSEQCNDLENVVTELTRIIKDGTLLKIQVD
ELSHAEIELKKAECRLNGLEALRRKVPLETFKEVLGEASRLQIGDEKLFINIFEVLTAAL
SWEERANHILSSDAQISDFEDLIRTSEGISVFLPSLENVKEAVSTARSWLNESKPFLYPC
IPVTPDSDGLLKSEALKELVAQSEKLKIRLIEISMLQKILDNCIQWEVQAYSVLDYTESL
LKINLEDGSAIGLTAKIELQIHSLESVLKMGSCLPIDFAVTQRLDDASAVLRCCLKSLSF
RDTTPVIEEVMMLLEVASHLPTTYASCELWSSLVGGMSWLKNALEIFLPCNRRKFKLSYV
EEVFRQSQILNVSFPAIVDQLKNAIKKHNLWLEQVQQYASVKSGDRSSFLLFQIKELGST
DAFNCLELEMVFSDVERVEQWRHNCENIAGLVGNVKSLPDALAEISGTLDRSLHIYNCKG
RKLEQLCIHCFCGSKDQKLLTCSICNDCYHFRCIEPIGHGDPNNCLKCICPYCNFIRSGN
IARSGGGYLTKRKQLPSLTKLTRILSEAKLLCVWIKERDILLQIVEKAELCRTRLTEVAD
RVLAHVDKDLDIVAEKLSTALKAVEAAGVYDHDSNCKFEMALARNSWRVRAQKLLESSLK
PTVQQIQRHLKEGSAISIPVGDYFREKLIEVKHRCVQWVDTAKKVSVDSGELELDKVYDL
IIEGNDLLVDVEKELKLLQDRSMLYCICRKPYDQRAMIACDKCDEWYHFDCIKLTSPPKV
YTCPACKLDNEYLSSSLSSSQERSTNKCEEPQTPSPGRPGSRRRTKQTDSLCRKRDKPDS
TENNIISRLPTGFGNLLWRNRKPFRRVARKREEFNILSLYHLQQ
NT seq 5535 nt   +upstreamnt  +downstreamnt
atggggaaaggaagacctaggtcagtagagaaaggtggattagggcaaaattcaagtcta
gggttagttaattcgatatgtataccatctgcgcctgtgtattatccaactgaagatgaa
tttaaggatcctctagagtttatttacaagattaggcctgaggccgagaggtttgggatt
tgtaaaatcgttccgcccgagagctggaagcctccgtttgctcttgatttggaaaagttt
atgtttccgactaagacgcaggccattcataggttgcaagttagggctgcgtcctgtgac
tcgaagacgtttgagttggagtatagtaggtttttggaggggagtggggggaagaaggcg
aagaagagggttgtgtttgagggggaggatttggatttgtgtaagttgtttaatgcggtg
aagaggtttggggggtatgatagggttgtcaaggagaagaagtggggggaggtttcaaag
tttgtgaggtcggtgaggaaggtttcggagtgtgctaagcatgtgttgtgtcagttgtat
agggagcatttgtatgattatgaggtttattatagtgagttgaatcgtgtggcggagaag
agtggtgtgcgtgatgagaggaaatgtgagccagaggtggatatgttgagttcgaaaagg
aaagggaagaatcaaggggacgggggagttgagttggttaaagtggaggagggagagctt
gatcaaatatgtgagcaatgtagaagcgggctgcatggtgaagtaatgctgttgtgcgac
aggtgtaataagggttggcatatatattgtttgtcacctcctttgaaacagattccagct
gggaattggtactgtttagattgcttaaattctgagaaagaatgttttggatttgtacct
ggtaggcatatttcactagaagcttttaggcgtgtagctgacagagcgaagaaaagatgg
tttggttcgggacctacctcaagagtccaactggagaagaagttttgggaaattgtagag
ggttcagctggtccggttgaagttaagtacggtagtgacttggatacgtccgtgtatggg
agtgggtttcctcgggttagcgaccaaaaaccagaagctctaggagaagacgtttgggat
gaatatcgtgcaagtccatggaatctcaataacttgcccaagctacaaggatcaatgctt
cgaacggttcatcatagtattgctggtgttatggtaccttggctttatattggaatgctg
ttttcatctttctgttggcattttgaagatcattgtttttactcgatgaattatcatcac
tggggagaaccaaaatgttggtacagtgtccctggcagtgaagcaagtgctttcgagaag
gtgatgagaaattcccttcccgatctattcgatgctcaaccagatttgctttttcagctt
gtcaccatgttaaatccatctgtcctgcaaaacagtaatgttccggtttacagtgtactg
caggagccaggaaactttgtcatcaccttccccagatcatatcatggaggtttcaactgt
ggcttaaattgtgcagaagcagtcaactttgctcctgctgattggctacctcatggaggt
tccggtgcggatctttataaactttatcgtaaatctcctgttttatctcacgaggagctt
atctgtgttgtggccaagactgaatttgatagcaaagtaacaccttacctaatgaaggaa
ttgctccgtatttacaacaaagagaaaagctggagagctagactttggagaaatggcatt
gtgcggtcttccttaatgtcgcctcgggagcagcctcagtatgtgggtgtcgaagaggat
cctacgtgcatcatatgccaacaatatttgtatctatctgctgttgcttgccgttgtagg
ccgtctacttttgtgtgtcttgagcactggaagcacctttgtgaatgcaaagcaaataaa
catcgcctcctttaccgtcattcactagcagagttaaataatctaattctgaatgttgct
gggaggggtgactacacagaggctacccaagataaaaatttacaaaagcagcaactctat
tcgcttgatattggtacattgtcaaaaaaggtaggaagtgtccacgtcaaccttgtgcaa
cttgctgaagagtggctttcaagatcttgtaagcttcttcagatgccatactccattgtt
gcttttgcaaatgcactaaaggaagctgaacagtttctttggggtggttctgaaatggac
tcggtgcgggaagcaacaaagaacttgattgaagctcagaattgggtagaaggtgtaaaa
gattgtgtagacaaagtggaattgcggttatgccatggcaacaatgacatggacagagta
catatgaaacatgttcgtgggttgctgaatatcgattctgtgccttgcaatgagcctgaa
tttctcaaactgaaggaatatgcagaagaagctgaagtattaattcaggacattgagtct
gctctttctatgtgcccccaagtctccattgttgattgggagattttgcatagcagagcg
tttgccttggggatctttgtcgaagaaagtgaaaaattatctaataagctttcttttgtg
aagatctgggtcgaaggtgtaagaaaatgcattatggaaaaatctccagcagcgattgag
gtagacagcttggacaagttgaagtctgaggtctcagaactccaaattcaactccctgaa
atcgaaatgcttggggatttaatgaggcgagtggaatcatgtcaatctcggtgtaacaag
atattggatggttctgtgaacctaaagcaacttgaattgtttctccaggaaatggatggt
ttcactgtcaatgtgcccgagttgaaacttttgaggcaatatcagaaggatgctgtctta
tggatctcccgctttcaaattgctgtgcaaaattctgaacaatgtaatgatctggagaat
gttgttactgagttgacacgcatcataaaagatgggactcttctgaaaattcaagttgat
gagctgtcacatgctgagattgagctaaaaaaggcggagtgcaggctgaatggacttgag
gctcttcgacgtaaagtgcctttagaaactttcaaagaagtactgggtgaggcaagcaga
ctgcagattggtgatgagaaactgtttatcaatatttttgaagtacttactgctgctttg
tcttgggaggagagagcaaatcatatactttcaagtgacgctcaaatatctgattttgag
gatcttataaggacatctgagggcatttcagtgtttttaccttctctggaaaatgtcaag
gaagcagtatcaacagctaggtcatggctgaatgaatccaaaccttttttgtatccgtgt
atccctgttacaccagactcagatggtttgctgaaatcggaggccctgaaggagttggtt
gcacagtcagagaaactgaaaatacgtttgatagaaatatctatgcttcagaaaatatta
gataattgcattcagtgggaggtacaggcatactctgtacttgattatacagagagccta
ctaaaaatcaatttagaggatggtagtgccattggcttaacagcaaaaattgaacttcaa
attcattcattggaatccgttctcaaaatgggttcttgtcttcctattgactttgctgtg
actcagagacttgatgatgcttctgctgttcttcgttgttgcttaaagtctctctccttt
cgtgatacaactccagtaattgaggaagttatgatgttactggaggttgccagccacctc
cccactacttatgcatcctgtgaattatggagttccctggttggtgggatgagctggctt
aagaatgcattggaaatattcttgccttgtaatcgtaggaaattcaagttgagttatgtt
gaagaagtttttcggcaatcacagattttaaatgtatctttcccagcgatagtagatcaa
cttaaaaacgctatcaagaagcacaatttgtggcttgagcaagtccaacaatatgccagt
gtgaagtctggtgaccggtcatcgtttttgctgttccagattaaggaacttggcagcact
gatgcctttaattgtttggaactggaaatggtcttttctgatgtggaacgggttgagcaa
tggaggcacaactgtgaaaatattgctgggttggttggaaatgttaagtcactaccagat
gctttggctgagataagcggtacccttgataggtccctgcatatatataattgtaaggga
cgcaaactagaacaattatgcatacactgcttctgtgggtcaaaggatcagaagctcttg
acttgttctatctgcaatgactgctaccatttcaggtgcattgagccgataggacacggt
gatccaaataattgtttaaaatgtatatgcccgtattgtaactttataagaagtgggaac
atagctagaagtggagggggctatttgacaaagagaaagcagttacctagcctgactaag
ctcactcgaattttatctgaagcgaagcttctgtgtgtgtggatcaaggagagggatata
cttctccaaattgttgaaaaagctgaattgtgcagaacacgcttaacagaagtagctgat
agagtcttggcgcatgttgacaaggatctcgatatagtggctgaaaagctttccacagca
ttaaaggcagttgaagctgcaggagtgtatgaccatgatagcaactgcaaatttgagatg
gcattagcaaggaattcatggagggttagagcccagaaactgttagaatcttcgctcaag
cctacagttcaacagattcaacgtcatttaaaagagggttctgccatcagcataccggtg
ggagattacttcagggagaaacttattgaagtgaagcatcgctgcgtgcaatgggtcgat
acggcgaagaaggtttcggtggattctggggaacttgagttggataaagtttatgaccta
ataatagaggggaatgatttgcttgttgacgttgaaaaagaactcaagcttttgcaagat
agaagtatgctctactgcatatgtcgaaagccctatgatcagagagcaatgattgcttgt
gataaatgtgatgaatggtatcattttgattgcatcaagttaacttcaccaccaaaggtt
tacacttgccctgcatgtaagctggacaatgaatatttgtcttcgtcactatcatcatca
caggagaggtctaccaacaaatgtgaagagccccagacaccttctccaggaagaccaggt
tcaaggaggagaacaaaacagacggattctctctgtagaaagagagacaaaccagacagc
actgaaaataatattatctcaaggcttccaactggttttggaaatttgttgtggagaaat
aggaagccttttagaagagtagccagaaaacgtgaagagtttaacattctgtccctttat
catttacaacaatga

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