Daucus carota (carrot): 108209500
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Entry
108209500 CDS
T05350
Name
(RefSeq) ABC transporter B family member 20
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108209500
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcr02000
]
108209500
04147 Exosome [BR:
dcr04147
]
108209500
04090 CD molecules [BR:
dcr04090
]
108209500
Enzymes [BR:
dcr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108209500
Transporters [BR:
dcr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108209500
Exosome [BR:
dcr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108209500
CD molecules [BR:
dcr04090
]
Proteins
108209500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_29
SMC_N
AAA_22
RsgA_GTPase
AAA_21
DUF87
Zeta_toxin
MMR_HSR1
AAA_16
AAA_15
AAA_23
AAA_18
AAA_30
SepSecS
Motif
Other DBs
NCBI-GeneID:
108209500
NCBI-ProteinID:
XP_017235922
UniProt:
A0A166DEJ5
LinkDB
All DBs
Position
2:complement(36589913..36599137)
Genome browser
AA seq
1398 aa
AA seq
DB search
MSSRGVFGWGQPDLIPLTPVSEVSEPPESPLPFMCENFEDVRGVEEEDEEEEEEREELAP
EAVPIWGLFACADWIDWILMLLGGLAAAAHGVAIVMYVHLFGKVLEILVVDDSVSKDELF
DKFTTQALHIMYIASGVFVAGWIEVSCWMLTGERQTAIVRSKYVHVLLNQDMSFFDTYGN
NGDIVSQVLGDVLIIQSAISEKVGNYIHNMATFFGGLVIGFINCWQISLITLAVGPFIVA
VGGISNIFLQKLAENIQDAYAEAASIAEQALSSTRTLYAFTNEPLSKYSYANSLQATLRY
GILVSLVQGLGLGFTYGLAICLCALQLWVGKFLITSGKASGGEIIAALFSVLLSGLGMNQ
AATNLYSFEQGRIAAYRLYEMISRSSSFVNQEGHTLASVQGFVEFRNVYFSYPSRPEVPI
LSGFYLTIPAKKTVAIVGRTGSGKSSLIPILERFYDPTLGEVLLDGENIKNLNLEWLRSQ
IGLVTQEPALLSSSIRDNISYGRVNATSHQIEEAAKVARLHAFISSLDKGYDTEVGRAGL
SLSQEQKVKLSVARAVLLNPSVLLLDDVAGSLNFEIGTSVQDAIDAITLGRSTLIITQRL
SLIKNSDYIAVMEDGQLVEVGTHDELSSLNGLYSELLRYEEALKLPERLLDRNQKEITVH
MNNDLSSSNSCQESSLPNLLKSSSLGDGNDVVVIQPDDMTYGSQRALISHSTDSEKTPDE
CLPPDAVDNILFIKSQEGFEIRLPQLSIHDGTAEGKQTSDAKDPKSTVSLLLTRDPKTET
CNLKSSNPTSQMVDACREENPNKASQRLPSFWRLVKLSLAEWLYAVLGSIGAAIFGACNP
LLAFVISLIVTAYYRDEGHHLRYEVNKWCLIITGIGVVTVVANFLQHFYFGIMGEKITER
VRRMMFSGMLRNEVGWFDKEENSVDILSMRLANDATFVRAAFSNRLSVIVQDGTAVVVAI
LIGMLLGWQLAFVALATLPVLIVSGIAQKMWLSGFSRGIQELHRKASLVLEDAVTNMYAV
VAFCAGNKVLELYGLQLKKIFRQNILHGMTIGFAFGFSQFLLFACNAFLLWYTAITVKNG
YIDLQAALKEYVVFSFITFALVEPFGLAPYIFKHRKSLSSVFEIIDRVPEIDPDDSAALK
PCNVYGNIEFKNVDFCYPSAPKVMILNNFSLKVSGGQTVAVVGVSGSGKSTIISLLERFY
DPSAGQISLDGRDLKLFNLRWLRNHVGLLHQEPVIFSASVRENIIYARHNATEAELKEAA
RISNAHHFISSLPHGYDTHLGIGGVELTPGQKQRIAIARVVLKNAPILLLDEATSTIESE
SSRAVQEALDTLVMGNKTTILIAHRASMMRHVDNVVVINGGQIVEQGSHDSLIQTKGLYA
KLMQPQFLKNHRQRWLGS
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctagaggcgtgtttggatggggccagccggatttgattccgttaacgccggtg
tcggaggtgtcggagccgccggagtcgccgttgccgtttatgtgcgagaatttcgaggat
gtgaggggagtggaggaggaggatgaggaggaagaggaggagagggaggagttggcgccc
gaggcggtgccgatttggggattgtttgcttgtgcggattggattgattggattttgatg
ttgcttgggggattggctgcggcggctcacggtgtggcgattgttatgtatgttcatttg
tttggcaaggtgttggagattttggttgttgatgattcggttagcaaggatgagttgttt
gacaagttcaccacgcaagctctgcacatcatgtatatagcttctggtgtttttgttgca
ggttggattgaggtttcatgctggatgcttactggtgaaaggcagactgctattgttagg
tcaaagtacgtacatgtattacttaatcaggatatgagtttcttcgacacatatgggaac
aatggggacattgttagccaagttctgggtgatgtgctaatcattcagtctgccattagt
gaaaaagttggaaattatattcacaacatggcaacattttttggtggactagtcattggg
ttcatcaactgttggcagatatctcttattacattagctgttggtccatttattgtcgct
gtagggggtatatcaaatatttttctccagaaacttgcagaaaacattcaagatgcttac
gctgaggctgcaagtatagctgagcaggctctgtcttccacaagaacactatatgcgttt
acaaatgaaccgttatccaagtactcttatgcaaattctcttcaagcaacactgagatat
ggtatattagtaagccttgtgcaaggacttggtcttggattcacttatggacttgcaatt
tgcttatgtgctttacaactttgggtcggaaagtttctaataacaagtggaaaagccagt
ggtggtgaaatcattgcagcacttttttctgtactcttaagtggccttgggatgaatcag
gcagcaacaaatctctattcatttgagcaagggagaattgctgcatatagattgtatgag
atgataagccgttcaagctcttttgttaatcaagagggacatactttagcatccgtgcaa
ggatttgtggagtttcggaatgtttattttagttacccatcacggccagaagtacccata
ctaagtgggttttatcttactatacctgctaagaaaactgttgcaatagttggcaggact
ggatcaggaaaaagtagtttaatcccaatactggagcgcttttatgatcctactttagga
gaagtacttttagatggagaaaatatcaaaaacctgaacttagaatggttaagaagtcaa
ataggacttgtgacccaggagcctgctttgctaagttcaagtattagagataatatttct
tatgggcgggtcaatgctacttcacatcaaattgaagaggctgctaaagtggcacgtcta
catgccttcataagttctcttgataagggatatgacactgaggtaggaagagctggttta
tcattgagtcaagaacagaaagtcaaactttctgttgctagggcagtgcttttaaaccct
tctgttcttttgcttgatgatgttgctggcagccttaattttgaaattgggacaagtgtt
caggatgccatagatgccatcacattgggacggtcaactttaatcattacgcagcgctta
agcctgattaagaactctgattatattgctgtgatggaggacgggcaactcgttgaagta
ggtactcatgatgagttgtccagcttaaatgggttgtactcagaactccttagatatgaa
gaggcactgaaacttcctgaaaggttgttggataggaaccagaaagagattactgtccat
atgaataatgacttatcgtcaagcaacagttgtcaagaatcttcattgccaaatcttctt
aagtcttcatcactcggggatggtaatgatgttgttgtcattcaacctgatgatatgacc
tatgggtctcagagagcattgatttctcacagcacagattcagaaaaaacaccagatgaa
tgcttgccaccagatgccgtggataatatattgtttataaaatcacaggaaggtttcgaa
ataagattacctcaactatccattcatgatggcactgctgaaggaaaacaaacttcagat
gctaaagatcccaaatccaccgtctcacttttattgacccgggatcctaaaactgaaact
tgtaatttaaagagttccaatcctactagtcagatggttgatgcctgtagagaagagaat
ccaaataaagcatctcaaagactcccatctttctggagacttgtaaaacttagtttggca
gagtggctttatgcagttttaggaagcatcggggcagctatatttggagcttgtaatcct
cttctcgcttttgtgatttcactaatagtgacagcctattacagggatgaaggtcatcac
ctgcgttatgaagtgaacaaatggtgcttaattatcacaggcatcggagttgtaactgta
gttgcgaattttttgcagcatttctactttggcataatgggagaaaaaataactgagaga
gtaaggcggatgatgttctcaggcatgctgcgcaatgaagttggatggtttgacaaagaa
gaaaatagtgttgacatcttatccatgcgcttggcaaatgatgccacgtttgtgcgtgct
gctttcagcaatcgcctttctgttattgtccaggatggtacagctgttgttgttgccatt
cttattgggatgctactgggatggcaattggcttttgtagctttagcaaccctacctgtt
ttgattgtttccggaattgctcagaaaatgtggctttcaggattttcaagaggtatacaa
gagctccacaggaaggcatctttggttcttgaggatgctgttactaatatgtatgctgtc
gtggcattttgtgctggaaacaaagttttggaactttatggattgcagctaaagaaaatt
tttaggcaaaacattctgcatggtatgacaattggttttgccttcggtttctcacagttc
cttctttttgcctgtaatgctttcctactctggtatactgctattacggtaaaaaatggc
tacattgatctacaagcagctcttaaagaatacgtggtcttttcttttataactttcgct
ctggtagagccatttggtctggccccttacatattcaaacatcgaaaatccctcagttcg
gtattcgagataattgatcgtgtcccagaaattgaccctgatgacagtgctgcattaaag
ccatgtaatgtctacggaaatattgagttcaaaaatgtggatttttgttatcctagtgct
ccaaaggtaatgatcttaaacaatttcagtcttaaagtcagcggagggcaaactgtagct
gtcgttggagtttctggttcaggaaagagtaccattatttcattgttagagaggttttat
gatccatctgcaggccaaatttcattggatggaagagatcttaaacttttcaatttgaga
tggctgaggaaccatgtaggtctacttcaccaagaacctgtaatattctcagcatccgtg
agagagaatatcatatatgccagacataatgcaactgaagctgagttgaaagaggcagct
cgaatatcaaatgcccatcatttcataagtagcttgcctcatggttatgacacccatttg
ggtataggaggagtagaactgacaccaggacaaaagcagagaattgcaattgccagggtt
gtgctaaagaatgcacccattttgttgttggatgaggccacctccaccattgaaagtgaa
tcgagtcgtgctgtacaggaggctctcgacacactggttatgggtaacaaaacaactatc
ctcattgctcatagagcatcaatgatgagacatgttgataatgttgtggttattaatgga
gggcaaatagtggagcaaggtagtcatgattctcttatacaaacaaaaggtctatatgct
aagttgatgcaacctcaatttcttaaaaaccaccggcagcgttggcttggttcgtag
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integrated database retrieval system