Daucus carota (carrot): 108212587
Help
Entry
108212587 CDS
T05350
Name
(RefSeq) ABC transporter B family member 15
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108212587
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcr02000
]
108212587
04147 Exosome [BR:
dcr04147
]
108212587
04090 CD molecules [BR:
dcr04090
]
108212587
Enzymes [BR:
dcr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108212587
Transporters [BR:
dcr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108212587
Exosome [BR:
dcr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108212587
CD molecules [BR:
dcr04090
]
Proteins
108212587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
Zeta_toxin
AAA_21
RsgA_GTPase
AAA_15
AAA_16
ABC_ATPase
DLIC
AAA_30
AAA_28
AAA_23
Motif
Other DBs
NCBI-GeneID:
108212587
NCBI-ProteinID:
XP_063945265
LinkDB
All DBs
Position
3:47905331..47911841
Genome browser
AA seq
1236 aa
AA seq
DB search
MGSIRCIFIHAAGADNFLMFFGLIGAIGDGIFMPVLIYTTSKLMNAIGDTSAGIDSQFIR
SINKNALALCYLACGQLFACFLEGYCWTRTAERQASRLRARYLKAVLRQDVGYFDLHVTS
IAEVITSVSSDSLIIQDVISEKVPLVVMNVAAFFGAYLVGFLMLWRLAIVGLPLVVILVV
PGLICGRNLMGIARDMRDEYNKAGTIVEKAISSIRTVYSFVGENKTTIEYSAALQGTVDL
GIKQGLAKGLAIGSNGLVFAIWAFMSYYGSRMVMYHGAHGGTVFAVGAANALGGLSLGTA
LSNVKYFSEAIAAGERIMEMINRIPVIDSENKEGDILANVLGEVEFKHIEFAYPSRPETT
IFKDLNLKIPAGKAVALVGGSGSGKSTVIALLQRFYDPVGGEIMVDGVGIEKLQLKWLRS
QMGLVSQEPALFATTIKENILFGKEYGSMEEVIGAARAANAHNFISQLPQGYDTQVGERG
VQMSGGQKQRIAIARAIIKVPRILLLDEATSALDSESERVVQEALDQASVGRTTIIIAHR
LSTIQHADLIAVIQDSKITETGSHHDLIEDTDSLYSTLVHLQRSQKNNVMLSTGTNNTNY
NGASKSKTDINSTSSRRFSRISRSSPANQGDGEHVNIEHKNTNQQTLLVPSFKRLLEMNL
PEWRQAVLGSAGAILFGAIQPIYSFTMGSMVSVYFLSDHAKIKEKTRIYALCFVGLALFS
FIVNVIQHYNFAAMGELLTKRIRERMLSKLLTFEIGWFDQDENSSGAVCSRLSKDANVVR
SLVGDRMALVVQTLSAVTIAFTMGLIIAWKLAIVIIAIQPLIIGCYYYKCILLKNMSAKA
IKSQDETSKLAAEAVSNLKTVTAFSSQDRILKMLEQAQEGPHCENARQSRYAGIGLGISQ
SLMACTWALNYWYGGKLLSDGLINSKAFFETFMILVSTGRVIANAGTMTSDIAKGSDAVG
SVFAVLDRITLINPEDPDGHKPEKIKGHLELQDVHFTYPLRPDVPIFAGFTIKIEAGKST
ALVGQSGSGKSTIIGLIQRFYDPLKGSVKIDGKDIRSFHLRSLRKHIALVSQEPTLFAGT
IRENITYGASDATNESEIIEAAKAANAHDFITGLKDGYDTGCGDRGLQLSGGQKQRIAIA
RAILKSPAVLLLDEATSALDSQTEKVVQDALEHLMVGRTSVVVAHRLSTIQNCDTIAVLD
KGKVVENGTHSALLAKGSAGAYYALVNLQRLRDTNG
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgggatcaattcgatgcatttttatccatgctgctggggctgataatttcttgatgttc
tttggcttaattggagccattggtgatggtatcttcatgcctgtcctgatttatacaact
agcaagctcatgaatgctattggggatacatctgcaggaattgattctcagttcatccgc
agcatcaacaagaatgcactagctttgtgctacttagcttgtggccagttgtttgcttgt
ttccttgaggggtactgctggacgagaactgcggaaagacaagcttcaagattaagagca
agatatttgaaagcagtactaaggcaagatgtcggttactttgatttgcatgtgacaagc
atcgcggaagtaatcactagcgtttctagtgacagcctcattattcaagatgttatcagt
gaaaaggtccccttggttgtgatgaatgtggctgcatttttcggtgcctatttggtggga
ttcttgatgttgtggagactagctattgttgggttgccgttggtggtaatattggttgtt
ccaggattgatttgtgggagaaatctaatgggaattgcaagagatatgcgagatgagtat
aacaaagcaggtacaatagtggaaaaagcaatctcatcaataagaacagtttattcattt
gttggagagaataaaaccacgatagagtactctgctgcactgcaaggaacagtagatttg
ggaattaaacagggattagcaaaaggtttggctattggaagtaatggccttgtgtttgct
atctgggccttcatgtcttactatggtagcagaatggtgatgtaccatggtgcccatggt
ggaactgtttttgctgttggtgctgccaacgctttaggtggattgtcacttggtactgct
ttatcgaatgtgaaatacttctctgaagccattgctgctggagaacgaataatggaaatg
ataaacagaatccctgtgattgattcagagaacaaggaaggtgatattctagcaaatgta
ttgggggaggtggaattcaaacacattgaattcgcatacccttcaagaccagaaactaca
atattcaaagacttgaacctcaagattcctgctgggaaggcagtggcattggtcggtggg
agcggctctgggaagtcaacagtaatagcattgttgcagagattttatgatccagtaggg
ggagaaataatggtggatggagtaggcatagagaagctgcagttgaaatggctgaggtca
caaatgggcttggtgagtcaagagccagcattatttgcaacaacaataaaagagaacata
ctttttggcaaagaatatggaagtatggaggaggttataggagcggccagagctgcaaat
gctcataacttcattagtcagttgcctcagggttatgatacccaggtgggggaaagaggc
gttcaaatgtcaggaggacaaaagcagagaatagcaatagctcgagcaattatcaaagta
cctcgcatcctcctcctagacgaggctaccagcgctttggactctgagtctgaacgtgtt
gtacaagaagcacttgaccaggcctctgttggccggaccaccatcatcattgcccaccgt
ctctcaaccatccaacatgctgacctcattgccgttattcaagatagcaaaatcacagag
actggctcacaccatgatctcattgaagatacagacagcctgtactcaactttagtccac
ctccaacgttcccaaaaaaataacgtgatgttgtctactggtaccaacaatactaattat
aacggtgcttcaaaatctaagactgacatcaatagtacaagttctcgaagattttcaagg
attagtcgatcaagccctgccaaccaaggagatggtgagcatgtcaatattgagcataaa
aatactaatcagcaaactttgttagtaccatcatttaaaagacttctggaaatgaatctt
cctgaatggaggcaagctgtattagggagtgctggggcaatcttatttggtgccattcag
ccaatttattctttcactatgggttctatggtatcagtgtattttctgtcggaccatgcc
aaaatcaaggagaaaactaggatttacgctctctgttttgttggtttggcactgttctct
tttatcgtcaatgtaattcagcactataacttcgcggctatgggtgagctcctgacaaag
aggatcagagaaagaatgttgtccaaattactcacttttgagattggttggtttgatcaa
gatgagaattccagtggtgctgtttgttccaggctctccaaagacgctaatgtggtgaga
tctttagtgggtgatcgcatggcccttgtagttcagacactatcagcagtgacaatagcc
ttcaccatgggcctaattattgcttggaagcttgctattgtaataatcgccatccagccc
cttatcattggttgctactactacaaatgtattttgcttaaaaatatgtctgcaaaggct
atcaagtcacaagacgagactagcaagctggcagcagaagctgtttcaaatctcaaaaca
gtcacagccttttcatcccaggaccgaatactcaaaatgctcgaacaagcccaagaaggc
ccacattgtgaaaatgctagacaatcaaggtatgcaggtatcggtctaggaatttcccag
agtctcatggcatgcacttgggcattgaactactggtatggcggcaaactcctttctgat
ggtctgatcaattccaaggctttctttgagacctttatgatcctggtaagtacaggtcgg
gtaattgctaatgccggaaccatgactagtgacattgccaaaggttctgatgctgttgga
tcagtttttgctgtcctggaccgaatcacgctcattaaccccgaagaccctgatggccat
aagcctgagaaaataaagggccaccttgagctccaggatgttcacttcacatatcccctg
cggccagatgtgccaatttttgcaggtttcacaatcaagattgaagcagggaaatcaaca
gcattagtggggcaaagcggctctggcaagtcaaccataattgggctgatccagagattc
tacgaccctcttaaaggttcagtaaaaatagatggaaaagatataagatcgtttcacctc
agatcactgaggaaacacattgcacttgtcagtcaagaacctacattgtttgctggaaca
atacgcgaaaacatcacctacggagcatctgatgcaaccaacgaatcagaaatcatcgag
gcagccaaggcagcaaatgctcatgatttcatcactggtctaaaagatggatatgataca
gggtgtggcgacagaggattacaactctctggtggtcaaaagcaacgcattgcaatcgcc
cgagcaatcctgaaaagtccagctgtgttactgttagatgaagctacaagtgctcttgat
agtcaaaccgagaaagtggtgcaagatgcactagagcatcttatggtgggaaggactagt
gtggtggtggcacatagattaagtacaatacaaaactgtgacacaattgcagtgcttgac
aaaggaaaggttgttgaaaatggaactcactcggccttgctagcaaagggatccgctggg
gcctattacgctttggttaaccttcaaagattaagggacaccaacggctaa
DBGET
integrated database retrieval system