Daucus carota (carrot): 108214605
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Entry
108214605 CDS
T05350
Name
(RefSeq) uncharacterized ATP-dependent helicase YprA
Organism
dcr
Daucus carota (carrot)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
ResIII
ubiquitin
Ribonuclease_P
Motif
Other DBs
NCBI-GeneID:
108214605
NCBI-ProteinID:
XP_017242190
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Position
3:complement(37668264..37696464)
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AA seq
1238 aa
AA seq
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MSDRTLESEEEMGEKEREIQVRSLTGESMTLSISESIRIDQLKLLLKQTFPPASSSPNFH
LFLKGMKLSLGSQISHYPTHPGDFFILIPFTKKDQKQEQKCEEVLAAPNVTSQCSSSNIA
HSTWSDLMQDLSCMQNTATNENQPYAELQGMTFDSRTGDSRKHNVTCSSETKWRTKSVSS
EHEETANSLLESILQSSSNNIFDGKNCERFLHLSGLIDCLADPLSGTCLLNNAISKDSEK
GPYLSKGGLCLCPLWMKDIMKRFCFLNLYSTVLGFQGKLVTFVGLKGALDQLTESGFQIG
ILDLEQLSALCPKVVHFVDSETKGKKSSNSLVIVKSQLDNSDQTMPTRSAAEKCMPLSKT
VNAMKKRDNFFKTELWNTVKSLLRETGNDMVKCFSVEDVIMFVNAKSAANNTKAKRPRSC
TSAPSTSVSMKEVCHDTQPLSPIEMVEHLRMGIGSKGQIVHIEDIPGRKADYVEIPVELS
KNVKSALKRNRITRLYSHQSESIKASLAGKNVVVATMTSSGKSLCYNLPVLEVLSQDLSA
CAFYLFPTKLKDQLRALSEIVEESNTNLNIGTYDGDTSQEDRLWLRDSARLLITNPDMLH
MSILPFHGQFRRILENLRFVIIDEAHAYKGAFGCHTALILRRLRRICAHVYGCNPSFVFS
TATSANPREHTMELANLSALELIQNDGSPSGLKRFVLWNPPLCLRTVSKKSKTGAGTNKT
SEKSVVVGRSSSIMEVSYLFAEIVQHGLRCIAFCKTRKLCELVLSYTREILQESAAHLVD
SVCAYRAGYIAQDRRRIETEFFDGRLLGVAATNALELGIDVGHIDVTLHLGFPGSISSLW
QQAGRAGRREKPSIAIYVAFEGPMDQYFMKFPHKLFKSPIECCHIDANNPQVLEQHLLCA
AHEHPLSLLHDEKHFGPGLKDAILTLQAKGNLSTDASRGSSDKMWCYIGHEKTPSHAVSI
RAIESERYKVVDEKNDEVLEEIEESKAFFQVYEGAVYMNQGKTYLIKKLDMSNKTALCQE
ADLKYYTKTRDYTDIHVAGGKLAYPARVCSGAYPRTSAQAHNCKVTTTWFGFRRIWKGSN
QVFDTVELSLPDYSYNSQAVWIRVAQWIKMSVETKGYSFRGGLHAACHALLNVVPLYIIC
NSSDIASECANPYDTRYVPERILLYDPHPGGTGIATQIQPLFTELMGAALELLISCCCSG
DAGCPNCVQNLACQEYNEVLHKDAAVMIIKGILEEEKS
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacagaaccctagagagtgaagaggagatgggcgagaaagagagagagattcaa
gttcgaagtctaacaggcgaatcaatgacgctctcaatctcagaaagcataagaattgat
caactcaagcttcttcttaaacaaactttcccccctgcttcctcttccccaaactttcat
ctcttcctaaagggtatgaaattgagtctgggaagtcaaattagtcactatcccacccat
cctggggacttttttattcttattccatttacaaagaaggatcagaaacaagagcagaaa
tgcgaggaagttttggcagcgccaaatgtcaccagtcaatgctcatcttctaatattgct
cattcaacctggtctgatctgatgcaagatctgtcttgcatgcagaatactgctacgaac
gaaaatcaaccttacgcagagcttcaaggcatgacttttgatagtagaactggagatagc
aggaaacataatgtaacatgttcttcagagacaaaatggagaactaaatctgttagcagc
gaacatgaagaaactgcaaacagccttttagagagcattttgcagtcatcaagtaataat
atattcgatggtaaaaattgtgaaagatttcttcacttatccggattaattgattgttta
gccgacccactctccgggacatgcctgttaaacaacgctatctcaaaggacagtgaaaag
ggaccatatctgagcaagggtggtttatgcttgtgtccattgtggatgaaggatataatg
aagaggttttgtttcctaaacctttactcaacagttcttggatttcagggcaaattggtc
acctttgttggtttgaaaggagctctggaccaacttacagaatctgggtttcagattggc
attttagaccttgagcaactgtcagcattatgtccaaaggtggttcattttgttgacagt
gagacaaaaggaaagaaatctagcaattcccttgtaattgtaaaatctcaacttgacaac
agtgatcaaactatgcctactcgttctgctgctgagaaatgcatgcctctttcaaaaaca
gtcaatgcaatgaagaaaagggataattttttcaaaactgaattgtggaatactgtcaaa
tcattattgcgtgaaactggaaatgatatggtcaagtgcttttctgtggaagacgttata
atgtttgtgaatgcaaagtctgctgcaaataacacaaaagctaaacggcctagaagttgc
acatctgctccatcaacttctgtttctatgaaagaagtctgtcatgacacacaaccgtta
tcacctattgaaatggtggaacatctgagaatgggtattggatctaaaggacagattgtt
cacattgaagatatacctggaagaaaagcagactatgttgagatcccagttgaactatca
aaaaacgtgaaatctgcacttaaacgtaacaggattactaggttgtatagccaccagtca
gaatcaatcaaagcttctcttgctggaaaaaatgttgttgtggcaaccatgacatccagt
gggaaatctctttgctacaatcttccagtcctggaagtactatctcaggatttgtctgct
tgtgctttttacctttttccaacaaagctcaaagatcaactgcgagctttgtcagaaata
gtggaagagtccaataccaacttaaatattggcacatatgatggtgatacgtctcaagaa
gatcggctgtggttgagggacagtgctaggctcttgataacgaatccagatatgttgcac
atgtctatcttgccattccatggacaatttaggcgaattctagaaaatcttaggtttgtc
ataattgacgaagcccatgcttacaagggagcatttggttgccatactgctctaattttg
aggagacttcgtcgaatctgtgctcatgtgtatggctgcaatccgtcatttgtgttttct
actgcaacttctgccaacccccgcgagcatacgatggaacttgcgaatttatcagcactt
gagctgattcagaatgatggtagcccttctggtctcaagcgttttgtcctttggaatcca
cctttgtgcctgagaactgtttccaagaagagtaagaccggcgctggaaccaataaaact
tctgagaaaagtgttgttgttggacgttcaagttcaattatggaggtttcctatctcttt
gcagaaattgttcagcatggacttcgttgcattgcattttgcaaaacacggaaactttgt
gaacttgtgttaagttatacacgcgagattcttcaggagagtgctgctcatcttgtggac
tctgtttgtgcttatcgtgctggctatattgctcaggatcgaagaaggatcgaaactgaa
ttctttgacgggagacttcttggcgttgctgcgacaaatgcccttgagttgggcattgat
gttgggcacattgatgtgactttgcatctaggttttcctggtagtatttcaagcttatgg
cagcaagctggaagagccgggagaagggaaaaaccatcaatagcgatatatgtagcattt
gaaggcccaatggatcagtattttatgaaatttcctcataaactctttaagagccctatc
gagtgttgccatatcgatgcaaataatcctcaggttcttgaacaacacttgctctgtgct
gctcacgaacatccattgagcttactccatgatgaaaagcattttggtccgggattaaag
gatgccatattaacacttcaggctaaagggaacctgagtactgatgcatcccgtggatct
tctgacaaaatgtggtgctatataggtcatgagaaaactccttcgcacgctgttagtata
cgggctatagagtcagagagatacaaagtagtggacgagaaaaatgacgaagttctggag
gagattgaggagagcaaagcattctttcaggtttatgaaggtgctgtttatatgaatcaa
gggaaaacttatctgattaagaagttggatatgtcaaataaaactgctttgtgccaagaa
gcagacttgaaatattatacaaaaactcgggattatacagacattcatgtcgctggtggt
aaacttgcatacccggcaagagtttgcagtggtgcataccctagaacaagtgctcaggca
cataattgcaaagtaacaactacgtggtttggttttcgtcgtatatggaaaggaagcaat
caagtgtttgacacagttgaactttctcttcctgattactcctacaattctcaggcggtt
tggattcgagtcgcacaatggataaaaatgagtgttgaaactaaaggatattcatttcgt
ggaggattgcatgctgcttgtcatgcacttcttaatgtagtacctctatatatcatttgc
aactcatctgatatagcttcagaatgtgcaaacccttatgatactcgctatgttcctgaa
aggattttgttatatgatccacatcctggtggaaccggcattgcaacacagattcaacct
cttttcactgaactgatgggtgcagctttggaacttctcatatcctgttgctgctctggc
gatgctggttgtccaaattgtgttcagaatcttgcttgtcaagaatataatgaggttttg
cacaaagatgcagctgtgatgattattaagggtattctggaagaggagaaatcttag
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