Daucus carota (carrot): 108218523
Help
Entry
108218523 CDS
T05350
Name
(RefSeq) ABC transporter B family member 20
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108218523
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcr02000
]
108218523
04147 Exosome [BR:
dcr04147
]
108218523
04090 CD molecules [BR:
dcr04090
]
108218523
Enzymes [BR:
dcr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108218523
Transporters [BR:
dcr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108218523
Exosome [BR:
dcr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108218523
CD molecules [BR:
dcr04090
]
Proteins
108218523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_15
AAA_29
Zeta_toxin
AAA_23
AAA_22
RsgA_GTPase
AAA_16
HupE_UreJ
AAA_30
DUF1240
Motif
Other DBs
NCBI-GeneID:
108218523
NCBI-ProteinID:
XP_017246990
LinkDB
All DBs
Position
4:30300219..30311697
Genome browser
AA seq
1400 aa
AA seq
DB search
MMVSRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDSSAADAVGVETEDEMDEEEEMEPP
PAAVPFSRLFACADRLDWVLMVFGSVAAAAHGTALVVYLHYFAKIIHLLSHSSDSPEKLF
DRFTELSLTILYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGN
NGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGFINCWQIALITLAAGPFIVA
AGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRY
GILISLVQGLGLGFTYGLAICSCALQLWVGRFLITHGKAHGGEIVTALFAVILSGLGLNQ
AATNFYSFEQGRIAAYRLFEMISRSSSTVNHDGNTLSSVQGNIEFRNVYFSYLSRPEIPI
LSGFYLTVPAKKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLDWLRNQ
IGLVTQEPALLSLSIRDNIAYGRDATMDQIEEAAKIAHAHTFISSLERGYQTQVGRAGLA
LTEEQKIKLSVARAVISSPSILLLDEVTGGLDFEAERSVQEALDLLMLGRSTIIIARRLS
LIKNADYIAVMEEGQLVEMGTHDELITLDGLYAELLKCEEAAKLPRRMPKRNYKEATAFQ
IEKDSSASHSFQEPSSPRMAKSPSLQRVSAIHAIQPPDGTFSSHESPRNQSPPPEHMAEN
GLALDGTDKEPSMRRQDSFEMRLPDLPKIDVHSANRHTSYTSDPESPVSPLLTSDPQNER
SHSQTFSRPLSEYDDLPMEMKEEKDVKHRGIPSFWRLVELSLAEWLYAVLGSIGAAIFGS
FNPLLAYVIALVVTTYYNKEKHNYREDVDKWCLVIACMGVVTVVANFLQHFYFGIMGEKM
TERIRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRVSIFIQDSAAVI
VAVLIGMILEWRLALVALGTLPVLTISAIAQKMWLAGFSKGIQEMHRKASLVLEDAVRNI
YTVVAFCAGNKVMELYRMQLRKIFKQSFLHGMAIGFAFGFSQFLLFACNACLLWYTAVCI
KHNYTSLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDNS
AMKPPNVYGSLELKKVDFSYPTRQEVLVLSNFNLKVNGGQTVAVVGVSGSGKSTILSLIE
RFYDPVSGQVFLDGRDLKVYNLRWLRNHLGVVQQEPIIFSTTVKENIIYARHNASEAEMK
EAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSI
ESESSRVVQEALDTLVMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGSHDMLMAKNG
LYVRLMQPHFGKGMRQRRLI
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgatggtatctagaggcctgttcggctggtcgccgccgcacatacaaccgctaactccg
gtgtcggaagtctcggagccgccggaatcgccgtcgccgtacttagatagcagcgccgct
gatgcggtcggagttgaaacggaggatgagatggatgaggaagaggagatggagcctcca
ccagctgcggtgccgttttcgagactgtttgcttgtgcggataggctggattgggtgcta
atggtgtttggatcggtagctgctgcagcgcacgggactgctttggttgtgtacttgcat
tatttcgcgaagattattcatttgctctcgcatagttccgattcgcctgaaaagttgttc
gataggtttactgagctttctttaacaattctttatattgctggtggtgtttttgctgct
ggatggattgaggtgtcatgttggattttaaccggagaacgtcagactgctgtgattaga
tcaagatatgttcaagtgctacttaatcaagatatgagttttttcgatacctatgggaat
aatggagacattgtgagccaagtattaagtgacgtgttgctcatccagtctgctcttagt
gaaaaagtaggaaattatattcataacatggctaccttcttcagtggtctcgtgattgga
ttcatcaactgttggcaaatagcgttaattacattagctgccggtccatttattgttgct
gcaggaggaatatcaaatatatttctgcataggcttgcggaaaacattcaagatgcatat
gctgaagcagcaagcattgcagaacaggcagtttcatacattagaaccttgtatgcattt
acaaacgaaacattagcaaaatattcatacgcaacttcgctacaagctaccctaagatat
ggtattttgataagtctcgtacaaggccttgggctgggattcacatacgggcttgcaatt
tgctcttgtgctctgcaactttgggtgggcaggttcttgattacgcatggaaaagctcat
ggaggtgaaattgtcacagccctttttgctgtcattttaagtggcctgggactaaatcaa
gctgcaacaaatttctattcatttgagcaaggtagaattgctgcttatagactttttgag
atgatcagtcgttcatcctccacagtaaaccatgatggaaataccctttcctctgtacaa
ggaaacatcgagtttcgaaatgtatatttcagctatctgtctcggcctgaaattcctatc
ttgagtgggttttaccttactgttcctgcaaaaaagactgtcgcccttgttggcagaaat
ggctctggtaagagcagtattataccactcatggagcgcttttatgatcctacattagga
gaagtactattagatggggaaaatatcaagaatctaaagctggactggctaagaaatcag
attggtttagtcactcaagaacctgctttgcttagtctgagcatcagggacaacattgct
tatgggcgggatgcgacaatggatcagatagaagaagcagctaaaatagcgcatgctcac
acatttatcagctcactcgaaagaggataccagacacaggtgggtagggctggattggca
ttgacagaagaacagaaaataaaactttcggttgccagagcagtcatttcaagcccgtct
attcttcttctggatgaggtcactggtgggcttgattttgaagcagagagatctgttcag
gaggctttagatcttctcatgttaggccgatcaactataataattgctcgacgacttagt
ttgataaaaaatgctgactatatagctgtaatggaagaaggtcaacttgttgaaatgggt
acccatgatgaattgattactttagatggcttatatgcggagcttctgaaatgtgaagaa
gctgcaaaattaccaaggaggatgcccaagcgaaactacaaagaggctacagcattccaa
attgaaaaagattcttcagcaagtcatagcttccaagaaccatcatctcccagaatggcc
aaatcaccatctctgcagagagtttctgctatccatgcaattcagcccccagacggcact
tttagctcgcatgaatcaccaagaaatcagagccctcctccagaacatatggctgaaaat
ggtctagcgttggatgggacagataaggaaccttcaatgagaagacaggatagtttcgaa
atgagactaccagatttgccaaagattgatgtccattcggcaaatagacatacgtcgtat
acttctgatcctgaatcgcctgtttcaccacttttgacatctgacccacaaaatgagcga
tcccattcacaaacctttagtcgaccactcagtgaatatgatgacttgccaatggaaatg
aaagaagagaaagatgtgaaacatcgaggaataccatcattttggaggcttgtcgagctt
agcttagcagaatggctttatgctgttctaggaagcataggggcagctatctttggttcc
ttcaatccgcttcttgcttatgttattgcacttgtagtgaccacatattataataaagaa
aaacacaactaccgggaagacgtagataaatggtgcttggtaattgcctgcatgggtgtt
gtaacagtggttgccaattttctgcagcacttttattttggtataatgggtgagaagatg
acagaaagaattaggagaatgatgttttcagcaatgcttcgcaatgaagtgggatggttt
gatgaagaagagaacagtgctgatactttatccatgcgtctagcaaatgatgctacattc
gtaagagctgcttttagcaaccgagtgtctatatttattcaagacagtgccgctgttata
gtggctgttctgatcgggatgatacttgaatggcgactggcacttgtcgctctggggaca
ctgcctgtgttaaccatttcagctattgctcagaaaatgtggcttgctggattctcaaag
ggtatacaagagatgcataggaaggcgtctttggtccttgaagatgctgtcagaaatata
tacactgtcgtggctttctgtgctggcaacaaggtaatggagctttacagaatgcaactg
aggaaaatatttaaacagagcttcctacatggaatggctataggctttgctttcgggttt
tcacaatttctgctatttgcgtgcaacgcatgtcttctctggtatactgcagtatgcatt
aaacataattacacaagtcttccaactgctctcaaggagtacatggttttctcttttgcc
acatttgctctcgtggagccatttggcttggctccttacatacttaaaagaaggaagtct
ttaatttctgtattcgaaatcattgatcgagttccgaagatcgaccctgacgataactca
gcaatgaaacctccgaatgtttatggtagtctggaattaaaaaaggttgacttttcttat
ccaacacgacaagaggtcttggtgttgagcaattttaatctcaaagtcaatggtgggcaa
actgttgcagtagttggggtttcagggtctggaaagagcaccatactatctttgatcgag
agattttatgatccagtttctggacaggtttttctagacggcagagatttaaaagtatac
aacttgaggtggttgcgcaatcaccttggtgttgttcaacaagaaccaatcatattctca
accacggtcaaggaaaatatcatttatgcgaggcacaacgcgagtgaagctgagatgaaa
gaagctgcaagaatagcgaatgctcaccattttatcagtagtttacctcatggttatgat
acacatgttggaatgaggggtgtggatcttaccccaggacagaaacaaagaattgcaatt
gctcgtgtcgtgttaaagaacgctcccattttgttattggatgaggcaagctcatcaatt
gagtccgaatcaagccgagttgttcaggaggcgctcgatacattagtcatggggaacaaa
accaccattctcatagcccatagagcagctatgatgagacatgttgacaacatcgttgta
ctgaatggaggccgaattgttgaggaggggagccatgatatgttgatggcaaagaatggc
ttgtatgtccggttaatgcagcctcactttggaaagggtatgaggcagcgtagactaata
taa
DBGET
integrated database retrieval system
