Daucus carota (carrot): 108222809
Help
Entry
108222809 CDS
T05350
Name
(RefSeq) protein ROS1-like
Organism
dcr
Daucus carota (carrot)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_DME
Perm-CXXC
HhH-GPD
EndIII_4Fe-2S
EFR3
Motif
Other DBs
NCBI-GeneID:
108222809
NCBI-ProteinID:
XP_017252213
LinkDB
All DBs
Position
5:complement(21759532..21767802)
Genome browser
AA seq
1540 aa
AA seq
DB search
MDMSGDNSRASWVSITPVKQNRDPICSYQQENQTTQPCNFVPGQVCKETELPESSQVSHV
LHGTGFPELSAHSSLTNPVKATTELSGTTFSMDCVDKNIPFCDLLALANAAAKTALGSND
VIGSIPVTRFEDKEAEEGNETNQLGKEKQFDNNMGVVQQTEQSSDAISSQVLEKNNSGPG
GNVSLGRSTPAQQKPRRKRYMPKVVREGQPKRTPKPTTPKPVKPNDTPKPKRKYVRKKGT
SIPQNPLFVDLTETDEETPINLTNTTRNFYPDTPSVNLDSSKSETAGRPQRSCRRSLNFD
SLQEEEESSPYSNASGFQSQISYAKFQSQLGQGPDVSAVKGQLDQIADVQSWSTRAKCRI
VFSDVTHDKESNVIQMIDLNSPPASSSPNDSNCSTSTPLSKEEHARRMKRGHPSPADDLY
NTNIVGARQNSVQAYLAKFPVDQDIDDGIPGMHFPAIYKKKRTEKCQNVIDQTTGYSPKV
NWGGAFTPESFAAQCAKPLITGTMMDTGNKGTRKKRSKASTRVRDIASLIEIAESIQSTR
LSIQQVGTSRQSYCHTAKTTKKRTKRNHRASGAFPVDALVEHLRHLDINAERKQVAYPNV
WARSYNTAQYQEQNAIVVYQRDGTLVTVKKRKSRPRVDLDDETTRVWKLLLQDINSEGIN
GTDEEKEKWWEEERRIFDGRANSFIKCMHLIQGDRTFSRWKGSVVDSVVGVFLTQNVSDH
LSSSAYMSLAAQFPLVEKSNHNPLSEDVVNITVNDLEACILNPDDTIEWHGIKSKPPTLT
QKSTILEDVESNEDIEVVNSNESSVSSMCCIIPKDISSCNCSDIAGTTSFVELLHMTEQN
KYNGTAISGIHWEGKEVFCSSESGLSRENASHSVVHHMVEIQSKEVQSCTRNDFPDCSIQ
TELDIVCHPQTSSSDLKNEVKSSDQDQVERINYTEGPRTLEETGGTGTSDISTKNEQESS
LEKHNSLSPTITDGKTYKPKRGRKGKQPAVKWDSLRKQAQVNGERVRTPDTSDSVDWEAV
RRADVEEVAHTIRERGMNNMLAERIKAFLDRLVSDHGSINLEWLRDVPPDKAKEYLLSIR
GLGLKSVECVRLLTLHHIAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQ
KYLWPRLCKLDQRTLYELHYQMITFGKVFCTKSKPNCNACPLRGECRHFASAFASARLAL
PGPEERSIVASGYNVVNPNPVVNINRLQLPASQSDQLSEKNMQISHCEPIVEVPASPEPI
IEVPATPEPERAEGGEDDIEDLFDEDPDEIPTIKLDIQEFTQTLQEYIHRNMELQECDVS
KALVALTPEAASIPAVKLKNVSRLRTEHQVYELPDTHPLLDGLDRREPDDPCSYLLAIWT
PGETADSIQPPAGPCNNQESGGLCSDETCFACSSTREAQSQTVRGTILIPCRTAMRGSFP
LNGTYFQVNEVFADHASSINPLNIPRYLLWNLPRKTVYFGTSVTSIFRGMETKDIQFCFW
RGFVCVRGFDRESRSPRPLMARLHFPPSKLSRGKEKKESE
NT seq
4623 nt
NT seq
+upstream
nt +downstream
nt
atggatatgagcggagataattcaagagcttcctgggtttctattaccccagtgaagcaa
aatcgagacccgatctgtagttatcagcaagaaaatcaaacaactcagccttgcaacttt
gttcctggacaagtttgcaaagaaactgagctgcctgaatcaagtcaggtctcccatgtt
cttcatggaactgggtttcctgaattatctgctcacagcagtttgacaaatcctgtgaaa
gcaaccactgaattgagtggtacaaccttctccatggattgtgttgataaaaatattcca
ttttgcgatctattggcacttgcaaatgctgctgccaagacagctttggggtcaaacgat
gttattggttctataccagtaactcggtttgaagataaagaagcagaagaagggaatgaa
acaaatcaattaggaaaggagaaacaatttgataacaatatgggtgttgtccagcaaaca
gaacaatcaagtgatgccatatcctcacaagtgttagagaaaaacaattctggtccaggg
ggtaatgtaagtttgggcagaagcacaccagcgcagcaaaaaccaaggagaaaaaggtac
atgcccaaggtagtaagagaaggccagcctaaaagaacccccaaaccaacaaccccaaaa
cctgttaaaccaaatgataccccaaaacctaagagaaaatatgttcgaaagaaaggaacc
agcattccacaaaatcctctctttgtagatttaactgaaacagatgaggaaactccaata
aacttaactaacacaaccagaaacttttacccagacactccctcggtaaatttagacagc
agtaagtcagagacagctggccgtccccaaagatcctgcagaagatcgttgaactttgac
agtttgcaagaggaagaagaaagttctccatacagcaatgcctcaggatttcaatcacaa
atttcttacgcaaaatttcaatctcagcttgggcagggaccggacgtgagtgctgtaaaa
ggtcaattggatcaaatagctgatgtccaaagttggagtacaagagccaaatgtcgcatt
gttttctcagacgtaactcatgacaaggagtcgaatgtcatacagatgatagatttaaat
tctcctccagcgtctagtagtccaaatgattccaactgcagcaccagtaccccattatcc
aaagaggaacatgctagaaggatgaagagaggacatccaagtcccgctgatgatctctat
aacaccaatatagttggggcacgccaaaattctgtacaagcatatctagcaaagttccca
gttgatcaggatatcgatgatggtattcctggaatgcactttccagcgatttataagaaa
aagagaactgaaaaatgccaaaatgtaatagatcagacaactggatactctccaaaggtt
aactgggggggtgctttcacaccagagtcatttgcagctcaatgtgctaaacctctcatt
actggaaccatgatggatacaggcaataagggaactagaaagaagcgctcaaaggcctct
actagagtacgggatatcgcttctctgattgaaattgcagagagcatacaatcaacaaga
ttaagtatccagcaagttggaacttcccgtcaatcatactgccatacagcaaaaacaacc
aagaagcgaactaagagaaatcatcgggcttcaggtgcgtttcctgttgatgcgctagtt
gaacatttaaggcatctagatatcaatgcagaaagaaagcaggttgcataccctaatgtg
tgggcacgcagctacaatactgcacaatatcaagagcaaaatgcaatcgttgtttatcag
agagatggcactcttgtgactgttaagaaacgaaaatcacgccctagagttgacctagat
gatgagacaactagagtctggaaacttctgctgcaggacataaatagtgaaggtattaat
gggacagatgaagagaaagaaaaatggtgggaagaggagagaagaatttttgatggaagg
gcaaactcatttattaagtgcatgcatcttattcaaggagacaggaccttttccaggtgg
aaggggtcagttgtggactctgttgttggtgttttccttacacagaatgtctcagaccat
ctgtccagttctgcctatatgtcactcgctgcacaatttccccttgttgaaaagagcaac
cataatccactttcggaagacgtggtgaacattacagtaaatgacttagaagcatgcata
ctaaatccagatgataccatcgaatggcatggtattaagtcaaagccacccactttaacc
caaaaatcaacaatacttgaggatgttgaaagtaatgaagacatagaagtagtcaacagc
aatgaatcctctgtaagcagcatgtgttgtattataccaaaagatatttcaagctgcaat
tgctcggacattgctgggaccacatcttttgttgagcttctacatatgacagaacaaaac
aagtacaatgggacagccatatcaggcatacactgggaaggaaaagaagttttttgtagt
tcagaaagtggattatcaagagaaaatgcaagccacagtgtagttcatcacatggtggaa
atccaaagtaaagaggtacagagctgcactcgaaatgatttcccagattgcagcattcaa
actgagttggatatagtgtgtcatcctcaaacatcttcttcagaccttaagaatgaggtc
aaatcctctgatcaagaccaggtcgagagaattaattatactgaaggacctaggacattg
gaagagacaggtggcactggtacttctgatatttctacaaagaatgagcaggaatcaagt
ctagaaaaacacaattctctttcacccacgatcactgatggcaagacttataaacccaaa
aggggaagaaaaggtaaacaacctgcagttaaatgggatagcttaagaaagcaagcacag
gtcaatggtgaaagagtgcgcacgcctgatacatctgactcggtggactgggaggcagta
aggcgtgctgatgttgaagaagttgctcacacaatcagagaaaggggaatgaacaacatg
cttgccgaaaggattaaggcattccttgatagacttgttagtgatcacggaagcattaac
cttgagtggttgagggatgtcccacctgacaaagcaaaagaatatctactgagcatcagg
gggctgggtttaaagagtgtcgaatgtgttcggcttctaacgctgcaccatattgctttc
ccagttgacacaaatgtgggacgtatagctgttagactgggatgggtaccgcttcagcca
ctgcctgaatcgctgcagttgcatttgcttgaattgtatcctgtgctggagtcgatccaa
aagtatctctggccaagactctgcaagctggaccaaagaacattatatgaattgcactac
cagatgatcacatttgggaaggtcttctgcacaaaaagtaaacctaattgcaatgcgtgc
cccctaagaggagagtgcagacattttgcaagcgcatttgcaagtgcaaggcttgcccta
ccagggccagaggaaagaagtattgttgcatcaggatataatgtagtcaatccaaaccct
gttgtgaacataaatagattacagctacctgcatctcagagtgatcaattatcggaaaag
aatatgcagatcagccattgtgagcctatagttgaagtacctgcatcaccagagcccata
attgaggtgccagcaacaccagagcctgaaagagcagaaggaggagaagatgacattgag
gacctttttgatgaagatcccgatgaaattcctacaatcaagttggacatccaggagttc
acacaaaccttgcaggagtacattcacaggaatatggaacttcaagaatgtgatgtgtcc
aaggctttggtggctttaactccagaagctgcatccatcccagcagtaaaactaaaaaat
gttagccgactaagaacagaacaccaagtgtatgagcttcctgatacacaccctctgttg
gatgggctggaccgaagagaacctgatgacccatgcagttaccttcttgctatatggact
cctggtgaaacagcagattcgattcaaccaccagcaggaccatgtaacaaccaggaatca
ggtggattatgcagtgatgaaacctgttttgcatgcagcagcacaagggaagcacaatcc
caaactgttcgagggactattttgataccctgccggactgctatgagagggagttttcca
ctcaatgggacatacttccaggttaatgaggtgtttgcagaccatgcttctagcataaac
ccactcaacatacctagatatttgttgtggaatttgccaaggaaaacagtgtacttcgga
acctctgtaacttctatatttagaggtatggaaactaaagacatccagttttgcttctgg
agaggtttcgtttgcgtgagaggatttgaccgggagagcagatctccaagaccacttatg
gcgaggctacattttccgccaagcaagttatccagagggaaagagaagaaagaaagcgag
tag
DBGET
integrated database retrieval system