Daucus carota (carrot): 108223944
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Entry
108223944 CDS
T05350
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2-like
KO
K05610
ubiquitin carboxyl-terminal hydrolase L5 [EC:
3.4.19.12
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108223944
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dcr01002
]
108223944
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108223944
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108223944
Peptidases and inhibitors [BR:
dcr01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
108223944
Ubiquitin system [BR:
dcr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
108223944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
DUF4763
COG6_C
HAUS-augmin3
HTH_63
DUF5667
Motif
Other DBs
NCBI-GeneID:
108223944
NCBI-ProteinID:
XP_017253911
UniProt:
A0A164Z587
LinkDB
All DBs
Position
5:31371029..31375323
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AA seq
334 aa
AA seq
DB search
MSWCTIESDPGVFTELIQQMQVKGVQVEELYSLDIDSLNSLRPVYGLIFLFKWRAGEKDD
RLVIKDPNPNLFFASQVINNACATQAILSILMNCPDVDIGPELTKLKEFTKNFPPELKGL
AINNSEPIRTAHNSFARPEPFVPDEQKVASKDDDVYHFISYIPVDGVLYELDGLKEGPIS
LGQCSGGQGNIDWLKMVQPIIQERIERYSQNEIRFNLLAVIKNRKEMYTVELKELQRKRE
RLLQQLATLQSERLVDSSNVEALNKSLSEVNTGIENATEKILIEEEKFNKWRTENIRRKH
NYIPFLFNFLKILAEKKQLRPLIEKAKQKANAPK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggtgtactattgagtccgatccaggtgtgtttactgaacttatacaacagatg
caagtcaaaggagtgcaggttgaggaattgtattcactggatatcgattctctgaattct
ttaaggccagtttatggactgatattccttttcaaatggcgtgcgggcgagaaggatgat
cgtcttgtaattaaggatccaaatcccaacctcttctttgctagccaggttattaataat
gcctgcgcaacccaagctattctttctatcctaatgaactgcccagatgttgatattggc
ccagaattgaccaagttaaaagaattcacaaaaaactttccacctgagctaaaaggtttg
gctatcaataatagtgaaccaattcgtacagctcacaatagttttgcaagacctgagcct
tttgttccggacgagcagaaagttgctagcaaagatgacgacgtgtatcattttataagc
tatattccagtagatggtgtgttatacgagcttgatggtttaaaagagggacctattagt
ctggggcagtgctctggtgggcaaggtaatattgattggttgaagatggtgcaacccata
attcaggaacgcattgagcggtattcccaaaacgagattagattcaatcttcttgctgtg
ataaagaacaggaaagagatgtatactgttgaacttaaagagcttcaaaggaagagggag
cgacttctccagcagttggctacactacagtctgagagactggttgatagcagcaatgta
gaagcgctgaacaaatcgctctctgaagtaaatactgggattgagaatgccacagagaag
atcttgatagaggaggagaaatttaacaagtggagaactgaaaacattcgccgaaaacat
aactacattccatttttgttcaactttctcaagattctggctgaaaagaagcagctgaga
cctctcattgaaaaagctaagcagaaagcaaatgctcctaaatga
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