Daucus carota (carrot): 108226406
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Entry
108226406 CDS
T05350
Name
(RefSeq) recQ-mediated genome instability protein 1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108226406
DNA repair and recombination proteins [BR:
dcr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
108226406
FA (Fanconi anemia) pathway
108226406
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
108226406
NCBI-ProteinID:
XP_017256850
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All DBs
Position
6:25295390..25300107
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AA seq
682 aa
AA seq
DB search
MMPPRRRNLRMVSSSSDEDDQPPPPPPLTHHQEEEFGNNNNNISIDLQTSTINFESVNLN
STNPNTQPIPLDISDDDEFIDVSDNLSPPEQNDSPPIEVGDCAISGFLAGLGVRLRREWL
DSCVSGLESAVNGFSRLDDVAKAKLCFEQVLYSDMNYVGAGVLPGNVVDMHLVDLAGPFV
LQVDEIVNISRPLKGRYQTAASGHKRCLKLSMTDGVQRVFGMEYRPIKNLEVLAPAGMKV
VVCNVNVRHGILMLVPEVLEVLGGHVEELEAARQRLVQEVNKPARGKRTKSGVVLPLETR
ATYAAWPRPNGLGAETQTNSSAPHNATPRPNGLGAQTQTNISAPHIATPRPNGFGAQTQT
NNSAPHNAAPFQADVPGNTPNNVSINQQTREESTVRIQRQYHEANDSSTVFSTLDDIQMV
DSNTSNNVSINQQSREESTLPIQRQVREANSSSTTFSSLDDIQVVDGNISTNVSINRQTG
EESTIPLQQHDHEANKSSTAFSSLDDIQMVDVEHLPVLTADGESPFTYLASLLTKWAAMN
GQIPNVQGKIKCFMTSVKSFQFRQRTTYELHAYVDDGSLISEILISHDLVLQAIGHPPEE
VNAAYLSPDQKIVDDMKKTLMQYQNFLFNFEGTMVIQISEASPLPVAIEMNQGCSASDAW
GLLRRLRPSRSVQQSNAINISP
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgccacgaagacgaaatctccgaatggtctcatcctcctccgacgaagacgac
cagccgccgccgccgccacccctgacccaccaccaagaggaagagttcggcaacaacaac
aacaacatatctattgatttacaaacatccactatcaatttcgaatcagttaatctcaat
tcaacaaaccctaatactcagcccattcctctcgatatctccgatgacgatgaattcatt
gatgtctccgataatttatctccgcctgagcaaaatgattcgcctccaattgaggtgggt
gattgtgctattagtggctttttagctggtttgggggtgagattacggagagagtggctt
gattcgtgtgtaagtggtctcgagagtgcggtgaatgggttttcgaggctggatgatgtg
gcgaaggctaagctttgtttcgagcaggttttgtattcggatatgaattatgtgggagct
ggtgtgctcccggggaatgtggtggatatgcatcttgtcgatttggctggaccgtttgtc
ttgcaggtggatgaaattgtgaatattagtcgtccgcttaaaggcagatatcagactgcg
gcttccggacataaaaggtgtcttaagttgagcatgacggatggtgttcaacgtgtgttt
ggcatggaatacaggccaattaaaaatcttgaagttctggctcctgctgggatgaaggtg
gttgtttgtaatgtaaacgtaagacatggaattttaatgctggttcctgaggttcttgag
gtattaggaggacatgttgaggaattggaagcagcacgtcagaggcttgttcaggaagta
aataagccagcaagaggaaaaagaacaaaatctggagtggtcctgcctttggaaactaga
gctacttatgctgcatggccgcgacctaatggactcggtgctgagacacaaactaatagt
tcagctcctcataatgcaactccgcgacctaatggactcggtgctcagacacaaactaat
atttcagcgcctcatattgcaactccgcgacctaatggatttggtgctcagacacaaact
aataattcggcacctcataatgcagctccttttcaggcggatgtcccaggaaacacaccc
aataacgtgtctatcaatcaacaaactagagaagagtcaactgttcgaatccagcggcaa
taccatgaagcaaatgactcatccactgttttctcaactcttgacgatattcaaatggtt
gacagtaacacatctaataacgtgtctatcaatcagcaaagtagagaagagtctactctt
ccaattcagcggcaagtccgtgaagcgaacagctcatctactactttctcaagtcttgac
gatatccaagtggttgatggtaacatatctactaacgtgtctattaatcgacaaaccgga
gaagagtctacgattcccctccagcagcatgaccatgaagcaaacaagtcatcaactgct
ttctcaagtcttgatgatattcaaatggttgatgtggaacatctacccgtactaactgca
gacggagaaagccccttcacctacttggctagtctgttaacaaagtgggcagcaatgaac
ggtcaaattcctaatgttcaaggaaaaattaagtgcttcatgaccagtgtgaagagcttc
cagttcaggcaaaggaccacatacgagcttcatgcttatgttgatgatggtagcctgata
tccgaaatcctcattagtcatgatcttgtgctacaagcaataggtcatcctcctgaagaa
gtaaatgctgcttatctttctccagaccagaagatagttgatgatatgaagaagactctg
atgcagtatcaaaatttcttatttaactttgagggaacaatggtgatacagataagtgaa
gcctctcctctcccggttgcgattgaaatgaaccagggttgttctgcgtctgatgcttgg
ggtcttcttagaagattaagaccctctcgatctgttcaacaatctaatgccatcaacata
tctccttga
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