Daucus carota (carrot): 108226526
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Entry
108226526 CDS
T05350
Name
(RefSeq) endo-1,4-beta-xylanase D
Organism
dcr
Daucus carota (carrot)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_10
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
108226526
NCBI-ProteinID:
XP_017256984
UniProt:
A0A161XBA7
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Position
6:complement(6239767..6243246)
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AA seq
553 aa
AA seq
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MKKYSSSSCTLLLLFTWISLASPYDGPLYDFSAYTECKLQPEQPLYGGGVIGDEAFYTPR
TTGDNKSILFSPAFVLHNITQGTIYSFSVWVKIDAAESASIKATLMIENTTDSCIGSVSA
KRGCWSFLKGGFISRSPHNTALINFQSSDARDIDIQVRSASLQPFTEEQWRFNQQYKINT
ERKRAVTIHVSDKEGIRLQEATIHVEQISRDYPFGSAIAKSIIGNTPYQKWFVERFNAAV
FENELKWYATEAKQGQLNYTLADKMLEFIRANQITVRGHNIFWEDPKYIPNWLLNLTASG
LQSAVNSRIQSLMSKYRNDFIHWDVNNENLHYDFYEKKLGPNATLDFFKTVHTSDPLATL
FLNDYNVVETCNDVNSTVDKFILKIDELKRGGAIMDGIGLESHFTVPNLPLMRAILDKFA
TLGLPIWLTEVDISNKFDHQTQALYLEQVLREGFSHPSVNGIMLWTALSPKGCYQMCLTD
DNFNNLPAGDVVDKLLKEWQTGTLESRTNEQGSYSFYGFLGEYKVTAQYGNSSSTSTFSL
CRGDETKHYNIQL
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatattcttcatcctcttgcacattgcttctcctcttcacatggatttccttg
gcttctccctacgatgggccactctatgatttctctgcttacactgagtgcaaattgcaa
ccggagcagccgctttacggcggtggtgttatcggagatgaggctttctatactccaagg
accaccggagataataaaagcattttattttcacctgcatttgtcctgcataatatcact
caaggcaccatttactctttttccgtttgggtgaagattgatgctgcagaatcagcgtcg
ataaaggcaacattaatgatagaaaatacaacagatagctgtataggatctgtgtccgca
aagcgtggctgttggtcatttctcaaaggtggcttcatttcaaggtcaccacataatact
gctcttataaactttcagagttcagatgcccgagacattgatatacaagtcagaagtgct
tctttgcaaccattcacagaggagcaatggagatttaatcagcagtacaaaatcaacact
gaaaggaagcgcgctgtgactattcatgtgtcggataaggaaggaattaggctgcaagaa
gcaacaattcacgtggaacaaatttcaagagactatccatttggatcagctattgcaaag
agcattattggaaacacgccttatcaaaaatggtttgtggagcgattcaatgcagcagtg
tttgaaaatgaactcaaatggtatgctacagaggcaaaacaaggacaactcaactacacc
ttggcagataaaatgctggagttcattagagctaaccaaatcactgttagaggtcacaat
atattctgggaggacccgaagtatattccaaactggctccttaatctaacagcttcaggt
ctccaatcagctgttaactcaagaatacagagtttaatgagtaaatacaggaatgacttc
atacactgggatgtcaataatgagaatcttcattatgatttctacgagaaaaagctaggg
cctaatgccactttggacttcttcaaaacagtgcatacttctgatccactagcaacattg
tttttgaatgattataatgtagttgaaacttgtaatgatgttaattccacagtagacaaa
tttatattaaagatagatgaactaaagcgtggtggtgcaataatggatgggattggctta
gagagtcattttacagtacctaatcttccactcatgcgagctattttggataagtttgca
accttaggccttcccatttggctcacagaagttgatatcagcaataaatttgaccaccag
actcaagccttatatctggagcaggtactacgagaaggcttctcacatccttctgtcaat
ggaataatgctgtggacagccttgagtccgaaagggtgttatcagatgtgccttactgat
gacaactttaataatcttccggctggcgatgttgtagacaagctgttaaaggaatggcaa
accggaactcttgagagccggacaaatgagcagggttcttatagcttctacggatttttg
ggtgaatataaggtgactgctcagtatggcaacagtagctcaacatcaacattctcactt
tgccgaggcgatgaaactaaacattataacattcaattgtag
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