Daucus carota (carrot): 108227230
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Entry
108227230 CDS
T05350
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108227230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcr02000
]
108227230
04147 Exosome [BR:
dcr04147
]
108227230
04090 CD molecules [BR:
dcr04090
]
108227230
Enzymes [BR:
dcr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108227230
Transporters [BR:
dcr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108227230
Exosome [BR:
dcr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108227230
CD molecules [BR:
dcr04090
]
Proteins
108227230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
Zeta_toxin
ABC_ATPase
AAA_29
AAA_30
RsgA_GTPase
AAA_5
SbcC_Walker_B
nSTAND1
APS_kinase
AAA_15
DUF815
Rad17
DUF87
DUF1360
Motif
Other DBs
NCBI-GeneID:
108227230
NCBI-ProteinID:
XP_017257763
UniProt:
A0A164WIJ9
LinkDB
All DBs
Position
6:31999239..32005463
Genome browser
AA seq
1391 aa
AA seq
DB search
MEREDKRGGRGWFVRKCKAMSQEYEEEEIKSNNNSNHNNNTCTVSSSEQWKCSETEGIQL
VVSTPPPQIHTHLQAQTFSEPQATPLDKAQEEAELFQEAKCKTEMEGSSDQGSSKKIDED
KKKQAAAVGFLELFRFADRLDYVLMIVGTVGAFVHGCSLPVFLRFFADLVNSFGSNADNI
DKMTQEVLKYAFYFLIVGAAIWASSWAEISCWMWTGERQTTKMRIEYLESALNQDVQFFD
TEVRTSDVVFGINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVP
LIAVIGAIHQITLSKLSAKTQEALSQAGNIAEQTVGQIRMVFAFVGESRALKAYSSALKT
AQRLGYKSGFSKGLGLGATYFTVFCCYALLLWYGGYLVRHHYTNGGLAIATMFSVMIGGI
ALGQSAPSMAAFAKARVAAAKIFLIIDHKPSVNRNSETGLELESVLGQVEIKNVDFSYPS
RPDVLILNNFSLSVPSGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGNDIKTLKL
RWLRQQIGLVSQEPALFATTIKENILLGRPDASLVEIEEAARVANAHSFIIKLTDGYDTQ
VGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTL
VIAHRLSTIRKADFVAVLHQGSVSEIGTHDELMFKGENGTYAKLIRLQEVAHETAINNAR
KSSARPSSARNSVSSPIITRNSSYGRSPYSRRLSDFSTSDFSLSLDVSYPGYRIEKLAFK
EQASSFWRLAKMNSPEWPYALVGSVGSVVCGTLSAFFAYVLSVVLSVYYNQDHAYMIREI
EKYCYLLIGVSSAALIFNTLQHFFWDVVGENLTKRVREKMLTAVLKNEMAWFDQEENESS
RIAARLALDANNVRSAIGDRISVIMQNSALLLVACSVGFALQWRLALVLIAVFPIVVAAT
VLQKMFMQGFSGDLEAAHAKATQLAGEAVANVRTVAAFNSESKIVRLFTSNLETPLRRCF
WKGQIAGSGYGIAQFLLYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETL
TLAPDFIKGGRAMQSVFDLLDRKTEIEPDDPDSTPMPDRIRGEVELKHVDFSYPSRPDMP
VFRDLSIRARAGKILALVGPSGCGKSSVIALVQRFYEPSSGRVIIDGKDIRKYNLKTLRR
HIAVVPQEPSLFATTIYDNIAYGHESATEAEITEAATLANAHKFISSLPDGYKTFVGERG
VQLSGGQKQRIAIARALLRKAELMLLDEATSALDAESERCVQEALERACSGKTTIIVAHR
LSTIRNAHVIGVIDDGKVAEQGSHSHLLKNYPDGCYSRMIQLQRFSHGQAVNMATGSSSS
TARPREDQDRE
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atggagagagaagataaaagaggagggagaggatggtttgttcgtaaatgcaaagcaatg
tcacaagaatatgaggaggaggaaataaagagcaataataatagcaatcacaataataat
acttgcactgtatcatcatcagagcagtggaaatgttctgaaactgaaggcattcagctt
gttgtttcaacacctccccctcaaattcacactcatttacaagctcaaacctttagtgaa
cctcaagcaactccattagataaagcccaagaagaagcagagctttttcaagaagcaaag
tgtaaaacagagatggagggtagttctgatcaggggagcagcaagaagattgatgaagat
aagaagaagcaggctgctgcagttgggtttttagagctcttcagatttgctgatagatta
gattatgttttgatgattgtgggcactgtgggtgcctttgttcatggctgttctttgcct
gtgtttcttagattctttgcagatcttgtgaattcttttggttctaatgctgacaatatt
gataagatgactcaagaagtactcaagtatgcattttactttcttatagttggagctgca
atttgggcttcttcatgggcagagatatcttgttggatgtggactggagagaggcaaaca
actaaaatgaggattgagtacttagaatcagctttgaatcaagatgttcaatttttcgat
actgaagttaggacttcagatgttgtgtttgggatcaacacggatgctgtcatggtccaa
gatgctattagtgaaaagttggggaatttcattcactatatggcaacttttgtttctgga
tttgttgtgggatttactgctgtgtggcaattagctttggtcacacttgcggttgttcct
cttatagctgtgattggtgctatccaccaaattacattatctaagctttctgctaagacc
caagaagctctttctcaggccggaaatattgcggagcagacagttggtcaaattcggatg
gttttcgcatttgtcggtgagtccagagctcttaaagcatactcgtctgctttgaagact
gcccaaaggctcggatacaagagtggattctcgaaggggttgggactcggggctacgtac
ttcactgtcttttgttgttatgctcttttgctttggtatggaggttatctggtgaggcac
cattacactaatgggggacttgctatagccacaatgttctcagttatgatagggggaatt
gctttaggacaatctgccccaagtatggctgcatttgcaaaggcaagagttgcagctgct
aaaatcttcctaattatcgatcacaaaccgagtgttaacagaaacagtgaaacgggcctg
gaactagaatcagttttaggacaagtcgagattaaaaacgtagatttttcatatccttcc
aggccagacgtactaatattaaacaatttttccttaagtgtgccgtccggaaagaccata
gctttagttggaagcagtggatctggaaagagcactgttgtttccctcattgagaggttt
tatgatcccacctcaggtcaagttttattggatggaaacgatataaagaccctaaagctt
agatggttgaggcagcagattggactggtgagccaagagccagcactatttgccaccaca
attaaagaaaacatactcctgggtaggcctgatgcaagcctcgtcgagatcgaagaagct
gctagagttgccaatgctcattcttttatcatcaagctcactgatggctatgacacacag
gtaggggagagaggattgcaactctctggtggacaaaagcagaggattgctatagcaaga
gcaatgctgaaaaatccagcaattttgctattggatgaagcaacaagtgcgctagactct
gagtcagagaagctagttcaagaagcccttgaccgtttcatgattggtagaacaactctt
gtcattgctcacagactatccacaatcaggaaggctgattttgttgccgtcctgcaccag
ggtagcgtctctgaaattgggacccatgacgagctcatgttcaaaggagagaacgggact
tatgccaaactcattcgtctgcaagaagttgcacatgaaactgccataaataatgctaga
aagagtagtgcaaggccttctagtgcaagaaattcagtgagttcacctataatcaccagg
aattcatcctatggacggtcaccatactcacgtcgcttatctgatttctccacctctgac
tttagcctatccctcgatgtatcatatccaggttacagaattgaaaagcttgcattcaag
gagcaagctagttccttctggcggttggcaaaaatgaattctccagaatggccatatgca
ttagttggttcagtaggttctgttgtttgtggtaccctcagtgcgttctttgcatatgtc
ctcagtgttgttcttagtgtttactacaatcaagaccacgcttacatgattagagaaatt
gaaaaatactgttatctgttgattggtgtctcatcagccgcgctgatatttaacacactg
cagcactttttctgggatgtagtaggagaaaatttgactaaacgggtaagagagaaaatg
ttgacagcagttctgaagaatgaaatggcttggttcgatcaggaggaaaacgagagctct
agaattgcagctaggctagctcttgatgccaataacgttaggtcagccattggggataga
atttcagtaatcatgcagaactcagcacttctgctagttgcctgctctgttggctttgct
ttacagtggcgcctagccctggtcctcattgccgttttcccaattgttgttgcagccact
gttttgcagaaaatgttcatgcaaggattttctggggacttggaagctgcgcatgccaaa
gccacacaattagctggggaagctgttgcaaatgtgagaactgttgcggcctttaattca
gagtccaagattgtcagacttttcacctccaacctagaaactccactacgccgctgtttt
tggaagggtcaaattgctgggagtggttatgggatagcccagtttttactgtatgcttca
tatgcccttggtctttggtatgcatcctggcttgtgaagcatgggatctctgacttctcc
aaaacgatcagagttttcatggttctaatggtgtccgcaaatggtgcggctgaaacactg
accctagcccctgacttcattaaaggtggtcgagccatgcagtctgtctttgacctcctt
gaccgcaaaactgaaattgaacctgatgatccagattccaccccgatgcctgatcgaatt
cgtggagaagtggaactgaaacatgtggacttttcttatccatcccgccctgatatgcca
gttttccgcgaccttagtattcgggctcgagctggtaaaattcttgcccttgttggccct
agcggatgtggaaagagctcagtcattgcacttgttcagagattctatgagccatcatcc
gggcgtgttataattgatggcaaagacattcgcaaatacaatctcaagacattgcggcgt
cacattgcagtagtcccacaagaaccaagtctatttgcaacaaccatatacgacaacatt
gcttacggccatgaatcagcaacagaagccgagataacggaagcagcaacattagctaat
gcccacaaattcatttcatcattgccagatggctacaaaacttttgttggcgaaagagga
gttcaattatccggaggacagaagcaaagaattgccattgctcgagctcttctaagaaag
gcagaactaatgctacttgacgaagccacaagtgcactagatgccgaatctgaaaggtgt
gtgcaagaggctctggagcgtgcttgctctggaaagaccaccatcatcgtggctcaccgc
ctatccacaataagaaacgctcatgtcattggagtcatcgacgacggaaaagtggcagaa
caaggctcacattcacatctactaaagaactaccctgatggctgttactcacgtatgata
cagctgcagaggttttcacatgggcaggctgtaaatatggcaacaggctcaagctcctca
acagcacgccccagggaggaccaagacagagaatga
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integrated database retrieval system
