Daucus carota (carrot): 108227366
Help
Entry
108227366 CDS
T05350
Name
(RefSeq) YTH domain-containing protein ECT1 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108227366
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108227366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
DUF3942
Motif
Other DBs
NCBI-GeneID:
108227366
NCBI-ProteinID:
XP_017257956
LinkDB
All DBs
Position
6:complement(35511176..35516623)
Genome browser
AA seq
603 aa
AA seq
DB search
MEKSGQPGPDRVASVSTSPVTGTSSFERQFVPDNLIEQTLPPKEEKVVSASSTDTNSVRP
PRIVTNPPELMVSSGALATSYQPNAYAPLDQSFYYGAYENGNGNWGEYPNYVNANNLQIM
PPAMFNDNPSLYFPSGYSFDTQMAYGQFPPLASPMSPFLLDGQLYSPHQIPMSPNYYPQS
ISPGLPHVTSSHSMSQTEMVTPVSTGQDSLNDNMLFGPGSGYYLHFGSFPASNPPGNSSL
GLYKYPGEFGSGENPAIRSNSSDTGNILSPLTPGAVYTQPVGILGSYDHSLAQASQQQTP
FTRRYQNNISSRIPNYGNWDASRFNRFTTDKGGRRDRDSASISADSHGPPNDRNRGPRAL
RPKIKNNTEEMAAPVITKAGASTSGVNLELYNQPDFVTDYEKAKFFVIKSFSEDNVHKSI
KYKVWASTPLGNKKLDAAYQEVKDDGGNYPVFLFFSVNASGQFCGVAEMTGPVDFENDAN
YWQQDRWSGQFPVRWHIVKDVPNGRFRHILLDNNDNKPVTHSRDSQEVKLEQGLAMLKIF
KDHESESSILDDFSYYDGREERSLQEKRTKQPCPDESPVAPIDQLLDHVASTLHLKVNDD
KRK
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggagaaatcgggtcaaccgggtccggatcgggtcgcttctgtctccacctctcctgtt
accggtacgtcttcatttgagagacaatttgttcctgataacttgattgaacagacattg
ccacctaaagaggagaaggttgtatctgcgagttctactgatacaaacagtgtcaggccg
ccaagaatagtaaccaacccgccagagttaatggtatcgagtggagcacttgccacttcc
taccaacctaatgcttatgctccactagaccaaagtttctactatggagcttatgaaaat
ggcaatggtaactggggggagtatcccaactatgtcaatgccaataatctacagattatg
cctccagcaatgttcaacgacaatccatcgctgtattttccttctggctacagctttgat
acccaaatggcatatggacagtttcctcctttggctagtccaatgtctccgtttttgcta
gatggtcagttgtactctccacatcaaatccctatgtcacccaactactatccgcaatcg
atttctccgggtctcccacatgttacctcttctcattcaatgtctcaaactgagatggtg
acaccagtaagtacaggtcaagacagtctgaatgacaatatgctttttggaccaggatct
ggttattacttgcactttggatcctttcctgctagtaatccacctggaaacagtagcctt
ggcttgtacaaatacccaggagagtttggatctggtgaaaatccagctatccgatcaaat
tcttctgacacgggcaacattttgtctccattgacaccaggagctgtttatacacagcct
gtgggcatacttggatcctatgaccatagcctggcacaggcttctcagcagcaaacacca
tttacaaggcgctatcagaataatatctcttctaggatcccaaactatggcaactgggat
gcgagtcgctttaatcgatttactactgacaaaggtgggagaagggatagggactcagct
agtatttctgctgattcacatggcccacccaatgaccgaaatcgaggaccaagagcattg
aggccaaaaattaaaaacaatactgaagaaatggctgcacctgttatcacaaaagcaggt
gcatctacttctggagtcaatcttgaactatacaaccaaccggattttgtcacagattat
gagaaggccaagttctttgtcatcaagtctttcagcgaggataatgttcacaaaagtatt
aaatataaagtttgggccagcacacctcttgggaacaagaaactggacgctgcttaccaa
gaagtcaaggatgatggtggcaattatccagtttttctgttcttctcggttaatgccagt
gggcaattttgtggtgtagctgaaatgactggacctgttgacttcgagaatgatgcaaat
tactggcagcaggatagatggagtggccagttccctgtccggtggcatatagtaaaagat
gtgccaaatggtcgatttcgccatattcttctggacaataatgataacaagcctgtaact
cacagccgagactctcaagaggtgaaactggaacaaggtctcgcaatgttgaaaattttc
aaagatcatgaatctgagtcatcaatcttagatgatttcagttattatgatgggagggag
gaacggtcattgcaggagaagaggactaaacagccatgtccagatgaaagtcctgttgct
ccaatagatcagttattggatcacgttgccagtacccttcatctgaaagtcaatgacgac
aaaagaaagtaa
DBGET
integrated database retrieval system
