Daucus carota (carrot): 108227808
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Entry
108227808 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108227808
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108227808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108227808
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
108227808
DNA repair and recombination proteins [BR:
dcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
108227808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
108227808
NCBI-ProteinID:
XP_017258649
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All DBs
Position
6:27710425..27715164
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AA seq
370 aa
AA seq
DB search
MNLADSESRPVLGPAGNKSRPVELRKPVAKPKSNTKMEVVSGEVKGKKSPTLSGAIPNGK
LMNCVVKKEQERRVFRSNLSMNASCSSDNSSDSSHSRASTGRITRKSVPILRKQSVTKAQ
KGVGSDGSVNGELGTGELVDAKKRCAWVTPNTDPCYVAFHDEEWGVPVHDDRKLFELLSL
STALAELTWPAILNKRQLFRDVFQDFEPVGVAKLNEKRITAVGSIASSLLSELKLRVIIE
NARQMCKIIDEFGSFDKYIWGFVNHKPTVGHFRYPRQVPIKTSKADVISKDLVKRGFRGV
GPTVVYSFMQVAGITNDHLISCYRFQECIVAECAKDKDGSFKDRFEGKQIEDEPDLGVTG
AIDGLSLSQD
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagctgattcggagtcacgtccggttctcggacccgccgggaacaaatctaga
ccggtggaattgcgtaaaccggtggcgaaaccgaagagtaacactaaaatggaggttgtt
agtggcgaagtcaaggggaagaagtcgccgacattgtcgggggcgattccgaatgggaag
ctgatgaattgtgtggtgaagaaggagcaggagcggagggtgtttaggtccaatttgtcg
atgaatgcgtcgtgttcttcggataattcgtcggattcgtctcatagtcgagcttcgact
gggaggattacgaggaagagtgtgccgattttgaggaagcagtcggttacgaaggctcag
aaaggtgttgggagtgatggaagtgtaaatggagaattgggaacgggggagttggttgat
gccaagaaaagatgtgcttgggttactccaaataccgatccttgttatgtcgcattccat
gacgaagaatggggggttccagttcacgatgataggaagctatttgaactgctgagctta
tcaactgctttggcagaacttacttggcctgccattcttaataaaaggcaattatttaga
gatgtatttcaggattttgaacctgtgggagtagcaaaattaaatgagaagagaattaca
gcagtgggaagcatagccagctcgcttctctcggagttgaagctacgagtaattatcgaa
aatgctcgtcagatgtgcaagattatagacgagtttggatcttttgataaatatatatgg
ggctttgtaaaccataaacccacagttggtcacttccgctatcccaggcaagttcccatc
aagacatcaaaagcagatgtgataagtaaagacctggtgaaaagagggtttcggggtgtt
ggtccaaccgttgtgtactcgtttatgcaagttgctgggataacaaatgaccatctcatc
agttgttatagatttcaggaatgcatagttgcagaatgtgcaaaagataaggatggcagc
ttcaaggatagatttgaagggaaacagatagaagatgaacctgacttgggtgtaacagga
gctatcgatggcttgagtctatcgcaggattag
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